Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3ewr | APR | Replicase polyprotein 1a | 3.4.22 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3ewr | APR | Replicase polyprotein 1a | 3.4.22 | 1.000 | |
| 2bfr | ADP | [Protein ADP-ribosylglutamate] hydrolase AF_1521 | 3.2.2 | 0.517 | |
| 5fsx | ADP | Uncharacterized protein | / | 0.516 | |
| 2bfq | AR6 | [Protein ADP-ribosylglutamate] hydrolase AF_1521 | 3.2.2 | 0.514 | |
| 5cb3 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.481 | |
| 2f98 | NGV | Aklanonic acid methyl ester cyclase AcmA | 5.5.1.23 | 0.462 | |
| 5cb5 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.454 | |
| 3sii | A1R | Uncharacterized protein | / | 0.451 | |
| 3w2e | NAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.449 | |
| 3sig | AR6 | Uncharacterized protein | / | 0.448 | |
| 1ib0 | NAD | NADH-cytochrome b5 reductase 3 | 1.6.2.2 | 0.445 |