Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3dsz | LIZ | Neutrophil gelatinase-associated lipocalin |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3dsz | LIZ | Neutrophil gelatinase-associated lipocalin | / | 1.000 | |
4iax | LIZ | Neutrophil gelatinase-associated lipocalin | / | 0.638 | |
4iaw | LIZ | Neutrophil gelatinase-associated lipocalin | / | 0.584 | |
2ktd | PUC | Prostaglandin-H2 D-isomerase | 5.3.99.2 | 0.450 | |
1lrj | UD1 | UDP-glucose 4-epimerase | 5.1.3.2 | 0.440 | |
4q73 | FAD | Bifunctional protein PutA | / | 0.440 |