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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3dk4FADGlutathione reductase, mitochondrial1.8.1.7

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3dk4FADGlutathione reductase, mitochondrial1.8.1.71.000
3dk8FADGlutathione reductase, mitochondrial1.8.1.70.878
3dk9FADGlutathione reductase, mitochondrial1.8.1.70.838
1bwcFADGlutathione reductase, mitochondrial1.8.1.70.628
1k4qFADGlutathione reductase, mitochondrial1.8.1.70.621
1greFADGlutathione reductase, mitochondrial1.8.1.70.614
1graFADGlutathione reductase, mitochondrial1.8.1.70.613
4gr1FADGlutathione reductase, mitochondrial1.8.1.70.611
1grgFADGlutathione reductase, mitochondrial1.8.1.70.610
1grhFADGlutathione reductase, mitochondrial1.8.1.70.605
3grsFADGlutathione reductase, mitochondrial1.8.1.70.603
1gsnFADGlutathione reductase, mitochondrial1.8.1.70.602
2gh5FADGlutathione reductase, mitochondrial1.8.1.70.565
2v6oFADThioredoxin glutathione reductase/0.550
1grbFADGlutathione reductase, mitochondrial1.8.1.70.548
3sqpFADGlutathione reductase, mitochondrial1.8.1.70.540
3dgzFADThioredoxin reductase 2, mitochondrial1.8.1.90.511
2nvkFADThioredoxin reductase 1, mitochondrial1.8.1.90.507
3djgFADGlutathione reductase, mitochondrial1.8.1.70.493
2rabFADGlutathione amide reductase/0.485
2r9zFADGlutathione amide reductase/0.473
1lvlFADDihydrolipoyl dehydrogenase1.8.1.40.464
2j3nFADThioredoxin reductase 1, cytoplasmic1.8.1.90.460
3djjFADGlutathione reductase, mitochondrial1.8.1.70.458
4kprFADThioredoxin reductase 1, cytoplasmic1.8.1.90.451
2cfyFADThioredoxin reductase 1, cytoplasmic1.8.1.90.448
3qfbFADThioredoxin reductase 1, cytoplasmic1.8.1.90.443