Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3cvu | FAD | RE11660p |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3cvu | FAD | RE11660p | / | 1.000 | |
| 2wq6 | FAD | RE11660p | / | 0.655 | |
| 2wq7 | FAD | RE11660p | / | 0.645 | |
| 2wb2 | FAD | RE11660p | / | 0.638 | |
| 3cvy | FAD | RE11660p | / | 0.638 | |
| 4dja | FAD | (6-4) photolyase | / | 0.575 | |
| 4jzy | FAD | Cryptochrome-1 | / | 0.569 | |
| 1np7 | FAD | Cryptochrome DASH | / | 0.560 | |
| 2j4d | FAD | Cryptochrome DASH, chloroplastic/mitochondrial | / | 0.554 | |
| 2vtb | FAD | Cryptochrome DASH, chloroplastic/mitochondrial | / | 0.539 | |
| 3zxs | FAD | Deoxyribodipyrimidine photolyase-related protein | / | 0.538 | |
| 2ijg | FAD | Cryptochrome DASH, chloroplastic/mitochondrial | / | 0.536 | |
| 4i6g | FAD | Cryptochrome-2 | / | 0.533 | |
| 1tez | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.520 | |
| 1owm | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.519 | |
| 1owl | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.513 | |
| 1own | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.513 | |
| 1qnf | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.513 | |
| 4gu5 | FAD | Cryptochrome-1 | / | 0.511 | |
| 2j07 | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.494 | |
| 1owo | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.493 | |
| 2j08 | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.493 | |
| 2j09 | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.489 | |
| 1u3d | FAD | Cryptochrome-1 | / | 0.485 | |
| 1dnp | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.482 | |
| 1owp | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.482 | |
| 3umv | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.474 | |
| 1iqr | FAD | Deoxyribodipyrimidine photo-lyase | 4.1.99.3 | 0.462 | |
| 1u3c | FAD | Cryptochrome-1 | / | 0.458 |