Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3cui | X4S | Exoglucanase/xylanase | 3.2.1.91 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3cui | X4S | Exoglucanase/xylanase | 3.2.1.91 | 1.000 | |
3emz | HXH | Endo-1,4-beta-xylanase B | 3.2.1.8 | 0.521 | |
4b13 | X25 | Glycylpeptide N-tetradecanoyltransferase | / | 0.476 | |
4e32 | DWN | Methyltransferase | / | 0.474 | |
2v5u | FMN | Flavodoxin | / | 0.472 | |
4l7h | 1W1 | Beta-secretase 1 | 3.4.23.46 | 0.461 | |
3bur | TES | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.453 | |
1uho | VDN | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.452 | |
4drj | RAP | Serine/threonine-protein kinase mTOR | 2.7.11.1 | 0.449 | |
4drj | RAP | Peptidyl-prolyl cis-trans isomerase FKBP4 | 5.2.1.8 | 0.449 | |
3qdz | PRO_ALA_PRO_ARG | Prothrombin | 3.4.21.5 | 0.447 | |
1nqu | RDL | 6,7-dimethyl-8-ribityllumazine synthase | 2.5.1.78 | 0.445 | |
2r86 | ATP | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase | / | 0.444 | |
4b12 | C23 | Glycylpeptide N-tetradecanoyltransferase | / | 0.444 | |
4j0z | 1H5 | Beta-secretase 1 | 3.4.23.46 | 0.443 | |
4nv1 | 4TG | Formyl transferase | / | 0.442 | |
3hmv | HBT | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.440 | |
4e2y | JHZ | Methyltransferase | / | 0.440 |