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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3csjCBLGlutathione S-transferase P2.5.1.18

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3csjCBLGlutathione S-transferase P2.5.1.181.000
3gusN11Glutathione S-transferase P2.5.1.180.605
13gsSASGlutathione S-transferase P2.5.1.180.584
1aqxGTDGlutathione S-transferase P2.5.1.180.582
3pgtGBXGlutathione S-transferase P2.5.1.180.562
3n9jEAAGlutathione S-transferase P2.5.1.180.560
20gsCBDGlutathione S-transferase P2.5.1.180.559
2pgtGPRGlutathione S-transferase P2.5.1.180.555
1gtiGTBGlutathione S-transferase P 12.5.1.180.549
1pgtGTXGlutathione S-transferase P2.5.1.180.548
3ie3N11Glutathione S-transferase P2.5.1.180.546
2oa7GTXGlutathione S-transferase P 12.5.1.180.530
2a2sGSNGlutathione S-transferase P2.5.1.180.525
12gs0HHGlutathione S-transferase P2.5.1.180.521
1aqv0HGGlutathione S-transferase P2.5.1.180.512
2oadGTBGlutathione S-transferase P 12.5.1.180.499
17gsGTXGlutathione S-transferase P2.5.1.180.497
9gssGTXGlutathione S-transferase P2.5.1.180.488
2glrGTXGlutathione S-transferase P 12.5.1.180.485
2j9hGTXGlutathione S-transferase P2.5.1.180.484
3o76GTBGlutathione S-transferase P 12.5.1.180.477
1tu8GTXGlutathione S-transferase 22.5.1.180.459
3dylIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.443
3dy8IBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.442
4ipw1G7Mycocyclosin synthase1.14.21.90.442
1uaeUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.440
2po3T4K4-dehydrase/0.440