scPDB - Distribution of Binding site Similarity values of 3c8b entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3c8b	ARG_ARG_GLY_ILE_NH2	Botulinum neurotoxin type A	3.4.24.69

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3c8b	ARG_ARG_GLY_ILE_NH2	Botulinum neurotoxin type A	3.4.24.69	1.000
3c89	ARG_ARG_GLY_MET_NH2	Botulinum neurotoxin type A	3.4.24.69	0.732
3qw8	CYS_ARG_GLY_CYS_NH2	Botulinum neurotoxin type A	3.4.24.69	0.629
3c8a	ARG_ARG_GLY_LEU_NH2	Botulinum neurotoxin type A	3.4.24.69	0.604