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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3c15FOKAdenylate cyclase type 2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3c15FOKAdenylate cyclase type 2/1.000
3c15FOKAdenylate cyclase type 5/1.000
1cjuFOKAdenylate cyclase type 2/0.672
1cjuFOKAdenylate cyclase type 5/0.672
1cjtFOKAdenylate cyclase type 2/0.655
1cjtFOKAdenylate cyclase type 5/0.655
1cjkFOKAdenylate cyclase type 2/0.648
1cjkFOKAdenylate cyclase type 5/0.648
1culFOKAdenylate cyclase type 2/0.645
1culFOKAdenylate cyclase type 5/0.645
1cjvFOKAdenylate cyclase type 2/0.643
1cjvFOKAdenylate cyclase type 5/0.643
1cs4FOKAdenylate cyclase type 2/0.635
1cs4FOKAdenylate cyclase type 5/0.635
1u0hFOKAdenylate cyclase type 2/0.618
1u0hFOKAdenylate cyclase type 5/0.618
1tl7FOKAdenylate cyclase type 2/0.607
1tl7FOKAdenylate cyclase type 5/0.607
3c16FOKAdenylate cyclase type 2/0.580
3c16FOKAdenylate cyclase type 5/0.580
3maaFKPAdenylate cyclase type 2/0.539
3maaFKPAdenylate cyclase type 5/0.539
2gvdFKPAdenylate cyclase type 2/0.526
2gvdFKPAdenylate cyclase type 5/0.526
3c14FOKAdenylate cyclase type 2/0.520
3c14FOKAdenylate cyclase type 5/0.520