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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3antS82Bifunctional epoxide hydrolase 23.3.2.10

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3antS82Bifunctional epoxide hydrolase 23.3.2.101.000
4jnc1LFBifunctional epoxide hydrolase 23.1.3.760.549
1ek2CDUBifunctional epoxide hydrolase 2/0.497
4haiI23Bifunctional epoxide hydrolase 23.1.3.760.481
3otqMZLBifunctional epoxide hydrolase 23.3.2.100.462