scPDB - Distribution of Binding site Similarity values of 3afh entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3afh	GSU	Glutamate--tRNA ligase 2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3afh	GSU	Glutamate--tRNA ligase 2	/	1.000
3akz	GSU	Glutamate--tRNA ligase 2	/	0.576
2cv2	GSU	Glutamate--tRNA ligase	6.1.1.17	0.465
2cv1	ATP	Glutamate--tRNA ligase	6.1.1.17	0.459
1n77	ATP	Glutamate--tRNA ligase	6.1.1.17	0.451
2dxi	ATP	Glutamate--tRNA ligase	6.1.1.17	0.444