Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3af4GCPPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3af4GCPPantothenate kinase2.7.1.331.000
3af2ACPPantothenate kinase2.7.1.330.601
3af1GDPPantothenate kinase2.7.1.330.599
2getCOKPantothenate kinase2.7.1.330.558
2zsbADPPantothenate kinase2.7.1.330.552
2zsaADPPantothenate kinase2.7.1.330.551
3af3GCPPantothenate kinase2.7.1.330.540
2gesCOKPantothenate kinase2.7.1.330.536
3af0GDPPantothenate kinase2.7.1.330.536
2zs9ADPPantothenate kinase2.7.1.330.522
1esmCOAPantothenate kinase2.7.1.330.518
3aezGDPPantothenate kinase2.7.1.330.514
2zs8ADPPantothenate kinase2.7.1.330.508
2gevCOKPantothenate kinase2.7.1.330.506
2zseACPPantothenate kinase2.7.1.330.505
2zsdCOAPantothenate kinase2.7.1.330.501
2geuCOKPantothenate kinase2.7.1.330.488
4bfsZVSPantothenate kinase2.7.1.330.478