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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3af3GCPPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3af3GCPPantothenate kinase2.7.1.331.000
3af2ACPPantothenate kinase2.7.1.330.669
2zseACPPantothenate kinase2.7.1.330.615
3af4GCPPantothenate kinase2.7.1.330.594
2getCOKPantothenate kinase2.7.1.330.593
2zsdCOAPantothenate kinase2.7.1.330.555
2zsbADPPantothenate kinase2.7.1.330.552
2zsaADPPantothenate kinase2.7.1.330.546
2geuCOKPantothenate kinase2.7.1.330.538
4bfsZVSPantothenate kinase2.7.1.330.538
2gesCOKPantothenate kinase2.7.1.330.536
3aezGDPPantothenate kinase2.7.1.330.530
1esmCOAPantothenate kinase2.7.1.330.522
3af1GDPPantothenate kinase2.7.1.330.513
3af0GDPPantothenate kinase2.7.1.330.509
2gevCOKPantothenate kinase2.7.1.330.505
2zs8ADPPantothenate kinase2.7.1.330.502
2zs9ADPPantothenate kinase2.7.1.330.501