scPDB - Distribution of Binding site Similarity values of 3a20 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3a20	FMN	FMN-binding protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3a20	FMN	FMN-binding protein	/	1.000
3vy5	FMN	FMN-binding protein	/	0.660
3a6r	FMN	FMN-binding protein	/	0.620
3vy2	FMN	FMN-binding protein	/	0.618
3a6q	FMN	FMN-binding protein	/	0.612
3awh	FMN	FMN-binding protein	/	0.589
1flm	FMN	FMN-binding protein	/	0.567
2e83	FMN	FMN-binding protein	/	0.561
1wli	FMN	FMN-binding protein	/	0.553
3amf	FMN	FMN-binding protein	/	0.548
1wlk	FMN	FMN-binding protein	/	0.476
3bnk	FMN	Flavoredoxin	/	0.472
1zeo	C01	Peroxisome proliferator-activated receptor gamma	/	0.449
1f20	FAD	Nitric oxide synthase, brain	1.14.13.39	0.442