scPDB - Distribution of Binding site Similarity values of 2zwv entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2zwv	SAH	Probable ribosomal RNA small subunit methyltransferase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2zwv	SAH	Probable ribosomal RNA small subunit methyltransferase	/	1.000
3dmh	SAM	Probable ribosomal RNA small subunit methyltransferase	/	0.669
2zul	SAM	Probable ribosomal RNA small subunit methyltransferase	/	0.654
3dmg	SAH	Probable ribosomal RNA small subunit methyltransferase	/	0.577
3ldf	SAH	Uncharacterized protein	/	0.445