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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2zsdCOAPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2zsdCOAPantothenate kinase2.7.1.331.000
2getCOKPantothenate kinase2.7.1.330.627
2gesCOKPantothenate kinase2.7.1.330.601
2geuCOKPantothenate kinase2.7.1.330.567
2gevCOKPantothenate kinase2.7.1.330.560
4bftZVTPantothenate kinase2.7.1.330.547
4bfsZVSPantothenate kinase2.7.1.330.546
1esmCOAPantothenate kinase2.7.1.330.545
4bfvZVVPantothenate kinase2.7.1.330.535
4bfxZVXPantothenate kinase2.7.1.330.510
2zsbADPPantothenate kinase2.7.1.330.496
3af2ACPPantothenate kinase2.7.1.330.493
3af4GCPPantothenate kinase2.7.1.330.488
4bfwZVWPantothenate kinase2.7.1.330.479
3af1GDPPantothenate kinase2.7.1.330.466
2zs8ADPPantothenate kinase2.7.1.330.462
3af3GCPPantothenate kinase2.7.1.330.461
3af0GDPPantothenate kinase2.7.1.330.460
2zsaADPPantothenate kinase2.7.1.330.459
3aezGDPPantothenate kinase2.7.1.330.450
2zs9ADPPantothenate kinase2.7.1.330.441