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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2zsbADPPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2zsbADPPantothenate kinase2.7.1.331.000
2zsaADPPantothenate kinase2.7.1.330.609
3af4GCPPantothenate kinase2.7.1.330.607
2getCOKPantothenate kinase2.7.1.330.599
1esmCOAPantothenate kinase2.7.1.330.592
3af2ACPPantothenate kinase2.7.1.330.592
3aezGDPPantothenate kinase2.7.1.330.578
3af0GDPPantothenate kinase2.7.1.330.574
2gesCOKPantothenate kinase2.7.1.330.573
2zs8ADPPantothenate kinase2.7.1.330.572
2zs9ADPPantothenate kinase2.7.1.330.558
2zsdCOAPantothenate kinase2.7.1.330.545
3af1GDPPantothenate kinase2.7.1.330.540
3af3GCPPantothenate kinase2.7.1.330.536
2gevCOKPantothenate kinase2.7.1.330.535
2geuCOKPantothenate kinase2.7.1.330.526
2zseACPPantothenate kinase2.7.1.330.524
4bfsZVSPantothenate kinase2.7.1.330.522
4bfxZVXPantothenate kinase2.7.1.330.448