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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2zs9ADPPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2zs9ADPPantothenate kinase2.7.1.331.000
3af0GDPPantothenate kinase2.7.1.330.600
3af1GDPPantothenate kinase2.7.1.330.574
2zs8ADPPantothenate kinase2.7.1.330.566
2gesCOKPantothenate kinase2.7.1.330.542
2zsaADPPantothenate kinase2.7.1.330.536
3aezGDPPantothenate kinase2.7.1.330.535
2zsbADPPantothenate kinase2.7.1.330.532
3af4GCPPantothenate kinase2.7.1.330.522
2getCOKPantothenate kinase2.7.1.330.510
2gevCOKPantothenate kinase2.7.1.330.505
2zsdCOAPantothenate kinase2.7.1.330.475
3af3GCPPantothenate kinase2.7.1.330.475
3af2ACPPantothenate kinase2.7.1.330.472
1esmCOAPantothenate kinase2.7.1.330.457
2geuCOKPantothenate kinase2.7.1.330.451
4bfsZVSPantothenate kinase2.7.1.330.446