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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2zs8ADPPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2zs8ADPPantothenate kinase2.7.1.331.000
3af0GDPPantothenate kinase2.7.1.330.630
2zs9ADPPantothenate kinase2.7.1.330.577
3af1GDPPantothenate kinase2.7.1.330.551
2zsbADPPantothenate kinase2.7.1.330.549
2zsaADPPantothenate kinase2.7.1.330.538
2gevCOKPantothenate kinase2.7.1.330.531
2getCOKPantothenate kinase2.7.1.330.517
2gesCOKPantothenate kinase2.7.1.330.508
3af4GCPPantothenate kinase2.7.1.330.507
3aezGDPPantothenate kinase2.7.1.330.500
3af2ACPPantothenate kinase2.7.1.330.489
2zsdCOAPantothenate kinase2.7.1.330.487
1esmCOAPantothenate kinase2.7.1.330.479
4bfwZVWPantothenate kinase2.7.1.330.468
3af3GCPPantothenate kinase2.7.1.330.455
2geuCOKPantothenate kinase2.7.1.330.454