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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2zi63D1Deoxycytidine kinase2.7.1.74

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2zi63D1Deoxycytidine kinase2.7.1.741.000
3qen5BTDeoxycytidine kinase2.7.1.740.599
2zi53L1Deoxycytidine kinase2.7.1.740.583
3qeoLLTDeoxycytidine kinase2.7.1.740.570
4jln18VDeoxycytidine kinase2.7.1.740.546
4jlm1NNDeoxycytidine kinase2.7.1.740.522
4l5b1UXDeoxycytidine kinase2.7.1.740.513
3mjrAC2Deoxycytidine kinase2.7.1.740.497
2jj8AZZDeoxynucleoside kinase/0.446