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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2wgs1AZGlutamine synthetase6.3.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2wgs1AZGlutamine synthetase6.3.1.21.000
3zxvMXIGlutamine synthetase6.3.1.20.515
1f1hADPGlutamine synthetase6.3.1.20.467
2gesCOKPantothenate kinase2.7.1.330.457
2braFAD[F-actin]-methionine sulfoxide oxidase MICAL11.14.130.456
3aezGDPPantothenate kinase2.7.1.330.454
2getCOKPantothenate kinase2.7.1.330.453
3af0GDPPantothenate kinase2.7.1.330.445
2zs9ADPPantothenate kinase2.7.1.330.442
2zsdCOAPantothenate kinase2.7.1.330.441
3af3GCPPantothenate kinase2.7.1.330.440