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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2vzzSCAPutative succinyl-CoA transferase Rv0802c2.8.3

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2vzzSCAPutative succinyl-CoA transferase Rv0802c2.8.31.000
1ozpACOMycothiol acetyltransferase2.3.1.1890.462
2cnsACORibosomal-protein-alanine acetyltransferase/0.457
3dr8ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase/0.454
1kkq471Peroxisome proliferator-activated receptor alpha/0.452
1p0hCOAMycothiol acetyltransferase2.3.1.1890.452
4jwpACOGCN5-related N-acetyltransferase/0.450
2cntCOARibosomal-protein-alanine acetyltransferase/0.449
2ou2ACOHistone acetyltransferase KAT5/0.443
3te5NAI5'-AMP-activated protein kinase subunit gamma/0.440