Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2vt4 | P32 | Beta-1 adrenergic receptor |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
2vt4 | P32 | Beta-1 adrenergic receptor | / | 1.000 | |
2ycy | P32 | Beta-1 adrenergic receptor | / | 0.632 | |
2ycx | P32 | Beta-1 adrenergic receptor | / | 0.605 | |
2ycz | I32 | Beta-1 adrenergic receptor | / | 0.597 | |
4bvn | P32 | Beta-1 adrenergic receptor | / | 0.593 | |
5a8e | XTK | Beta-1 adrenergic receptor | / | 0.593 | |
5d6l | CAU | Beta-2 adrenergic receptor | / | 0.590 | |
5d5a | CAU | Beta-2 adrenergic receptor | / | 0.589 | |
4ami | G90 | Beta-1 adrenergic receptor | / | 0.582 | |
5d5b | CAU | Beta-2 adrenergic receptor | / | 0.578 | |
2rh1 | CAU | Beta-2 adrenergic receptor | / | 0.574 | |
4amj | CVD | Beta-1 adrenergic receptor | / | 0.573 | |
5jqh | CAU | Beta-2 adrenergic receptor | / | 0.569 | |
3zpq | XF5 | Beta-1 adrenergic receptor | / | 0.561 | |
2y01 | Y00 | Beta-1 adrenergic receptor | / | 0.558 | |
4gbr | CAU | Beta-2 adrenergic receptor | / | 0.557 | |
2ycw | CAU | Beta-1 adrenergic receptor | / | 0.556 | |
3ny9 | JSZ | Beta-2 adrenergic receptor | / | 0.556 | |
2y03 | 5FW | Beta-1 adrenergic receptor | / | 0.555 | |
5f8u | P32 | Beta-1 adrenergic receptor | / | 0.553 | |
2y04 | 68H | Beta-1 adrenergic receptor | / | 0.550 | |
3d4s | TIM | Beta-2 adrenergic receptor | / | 0.547 | |
2y02 | WHJ | Beta-1 adrenergic receptor | / | 0.534 | |
3ny8 | JRZ | Beta-2 adrenergic receptor | / | 0.520 | |
4iar | ERM | 5-hydroxytryptamine receptor 1B | / | 0.519 | |
3nya | JTZ | Beta-2 adrenergic receptor | / | 0.502 | |
3sn6 | P0G | Beta-2 adrenergic receptor | / | 0.484 | |
4lde | P0G | Beta-2 adrenergic receptor | / | 0.470 | |
4iaq | 2GM | 5-hydroxytryptamine receptor 1B | / | 0.465 | |
3pbl | ETQ | D(3) dopamine receptor | / | 0.461 | |
4ldl | XQC | Beta-2 adrenergic receptor | / | 0.454 | |
3qi4 | IBM | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.453 | |
1pj6 | FOL | Dimethylglycine oxidase | 1.5.3.10 | 0.443 | |
4a95 | 9MT | Glycylpeptide N-tetradecanoyltransferase | / | 0.443 | |
3v94 | WYQ | Phosphodiesterase | / | 0.441 |