scPDB - Distribution of Binding site Similarity values of 2uyh entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2uyh	SAH	Modification methylase HhaI	2.1.1.37

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2uyh	SAH	Modification methylase HhaI	2.1.1.37	1.000
5mht	SAH	Modification methylase HhaI	2.1.1.37	0.692
9mht	SAH	Modification methylase HhaI	2.1.1.37	0.684
8mht	SAH	Modification methylase HhaI	2.1.1.37	0.665
2c7q	SAH	Modification methylase HhaI	2.1.1.37	0.637
7mht	SAH	Modification methylase HhaI	2.1.1.37	0.622
2i9k	SAH	Modification methylase HhaI	2.1.1.37	0.614
1skm	SAH	Modification methylase HhaI	2.1.1.37	0.612
3mht	SAH	Modification methylase HhaI	2.1.1.37	0.608
2zcj	SAH	Modification methylase HhaI	2.1.1.37	0.603
2z6u	SAH	Modification methylase HhaI	2.1.1.37	0.590
1fjx	SAH	Modification methylase HhaI	2.1.1.37	0.578
4mht	SAH	Modification methylase HhaI	2.1.1.37	0.562
10mh	SAH	Modification methylase HhaI	2.1.1.37	0.531
1mht	SAH	Modification methylase HhaI	2.1.1.37	0.524
2hmy	SAM	Modification methylase HhaI	2.1.1.37	0.514
3qv2	SAH	5-cytosine DNA methyltransferase	/	0.472
4h0n	SAH	Dnmt2	/	0.447
4dkj	SAH	Cytosine-specific methyltransferase	/	0.442