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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2qxwLDTAldose reductase1.1.1.21

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2qxwLDTAldose reductase1.1.1.211.000
2i16LDTAldose reductase1.1.1.210.814
3ghuLDTAldose reductase1.1.1.210.807
2i17LDTAldose reductase1.1.1.210.777
3g5eQ74Aldose reductase1.1.1.210.752
3ghtLDTAldose reductase1.1.1.210.751
1z3n3NAAldose reductase1.1.1.210.739
3ghsLDTAldose reductase1.1.1.210.729
1z8962PAldose reductase1.1.1.210.722
1us0LDTAldose reductase1.1.1.210.712
2duzZSTAldose reductase1.1.1.210.711
1t40ID5Aldose reductase1.1.1.210.705
3ld5LDTAldose reductase1.1.1.210.703
2fz8ZSTAldose reductase1.1.1.210.689
3ghrLDTAldose reductase1.1.1.210.687
2duxZSTAldose reductase1.1.1.210.680
2pdmZSTAldose reductase1.1.1.210.667
2iki388Aldose reductase1.1.1.210.663
2hv5ZSTAldose reductase1.1.1.210.654
1pwlBFIAldose reductase1.1.1.210.650
2pdg47DAldose reductase1.1.1.210.650
2hvoZSTAldose reductase1.1.1.210.647
3mb9ZSTAldose reductase1.1.1.210.639
2hvnZSTAldose reductase1.1.1.210.636
2pzn393Aldose reductase1.1.1.210.636
4yu153NAldose reductase1.1.1.210.636
3lboLDTAldose reductase1.1.1.210.634
2pdp393Aldose reductase1.1.1.210.624
3lqlLDTAldose reductase1.1.1.210.621
2fz9ZSTAldose reductase1.1.1.210.619
2pdu393Aldose reductase1.1.1.210.618
1t41ID5Aldose reductase1.1.1.210.606
2ikhLITAldose reductase1.1.1.210.606
2pdh47DAldose reductase1.1.1.210.606
2pdiZSTAldose reductase1.1.1.210.606
2pdfZSTAldose reductase1.1.1.210.605
2dv0ZSTAldose reductase1.1.1.210.604
2pdxZSTAldose reductase1.1.1.210.604
1ieiZESAldose reductase1.1.1.210.603
4gca2X9Aldose reductase1.1.1.210.602
3lz5LDTAldose reductase1.1.1.210.597
2pdbZSTAldose reductase1.1.1.210.596
3t423T4Aldose reductase1.1.1.210.596
2ikj393Aldose reductase1.1.1.210.590
3lenZSTAldose reductase1.1.1.210.590
3mc5393Aldose reductase1.1.1.210.590
2pdc393Aldose reductase1.1.1.210.588
2pdn47DAldose reductase1.1.1.210.587
2pdlTOLAldose reductase1.1.1.210.585
3m4h388Aldose reductase1.1.1.210.585
1frbZSTAldose reductase-related protein 2/0.584
3m0iZSTAldose reductase1.1.1.210.574
2pd5ZSTAldose reductase1.1.1.210.573
2pdj393Aldose reductase1.1.1.210.565
1ah3TOLAldose reductase1.1.1.210.543
2fzdTOLAldose reductase1.1.1.210.543
2pdq47DAldose reductase1.1.1.210.531
1zuaTOLAldo-keto reductase family 1 member B101.1.10.526
3m64393Aldose reductase1.1.1.210.506
2pdyFIDAldose reductase1.1.1.210.502
4li61XOTankyrase-12.4.2.300.502
4jt81NRNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.496
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.495
4ga8SBIAldo-keto reductase family 1 member B101.1.10.494
1zklIBMHigh affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A3.1.4.530.490
3zecANPAdenosine monophosphate-protein transferase SoFic2.7.7.n10.490
2f2kTGGAldose reductase1.1.1.210.489
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.488
2psjCEIRenilla-luciferin 2-monooxygenase1.13.12.50.487
2aot2PMHistamine N-methyltransferase2.1.1.80.486
2ipiAKYAclacinomycin-N/aclacinomycin-A oxidase/0.484
2is72CLAldose reductase1.1.1.210.484
3f3y4OABile salt sulfotransferase2.8.2.140.484
1p91SAM23S rRNA (guanine(745)-N(1))-methyltransferase/0.483
2agtFIDAldose reductase1.1.1.210.483
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.483
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.482
3aivHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase, chloroplastic3.2.1.1820.482
3jsxCC2NAD(P)H dehydrogenase [quinone] 11.6.5.20.481
2iqdLPAAldose reductase1.1.1.210.479
3lz6A0DCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.479
5liu388Aldo-keto reductase family 1 member B101.1.10.479
2v0mKLNCytochrome P450 3A4/0.478
1lnmDTXBilin-binding protein/0.477
3g72A6TRenin3.4.23.150.477
4c2z646Glycylpeptide N-tetradecanoyltransferase 1/0.477
4lsaBLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.476
2aovC2MHistamine N-methyltransferase2.1.1.80.475
3g493G4Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.474
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.474
4ky404JBifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.474
3zkyWT4Isopenicillin N synthase1.21.3.10.472
4jsr1NQNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.472
4uugPXGBranched-chain amino acid aminotransferase, putative/0.472
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.471
3ghvGHCDihydrofolate reductase1.5.1.30.470
4pabTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.470
4pnrG18Tankyrase-22.4.2.300.470
1h35R01Squalene--hopene cyclase4.2.1.1290.469
2inzOHPAldose reductase1.1.1.210.468
2pdwFIDAldose reductase1.1.1.210.468
1ekoI84Aldose reductase1.1.1.210.467
1ndyFR3Adenosine deaminase3.5.4.40.467
1yw7A41Methionine aminopeptidase 2/0.467
3af0GDPPantothenate kinase2.7.1.330.467
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.467
4jt91NSNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.467
3ny8JRZBeta-2 adrenergic receptor/0.467
2fzbTOLAldose reductase1.1.1.210.466
2xujTZ5Acetylcholinesterase3.1.1.70.466
4dbuBT9Aldo-keto reductase family 1 member C3/0.466
1tbbROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.465
1oynROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.464
1lkeDOGBilin-binding protein/0.463
4htx19FcGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.463
1obnASVIsopenicillin N synthase1.21.3.10.462
1ry0PG2Aldo-keto reductase family 1 member C3/0.462
1rxjBNIStreptavidin/0.461
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.461
3h3r14HCollagen type IV alpha-3-binding protein/0.461
4kw51W6Decaprenylphosphoryl-beta-D-ribose oxidase/0.461
1kwcBPYBiphenyl-2,3-diol 1,2-dioxygenase1.13.11.390.460
1r8qAFBCytohesin-2/0.460
1r8qAFBADP-ribosylation factor 1/0.460
2xuiTZ5Acetylcholinesterase3.1.1.70.460
4phlPILPhosphodiesterase/0.460
1blzACVIsopenicillin N synthase1.21.3.10.459
2iodMYCDihydroflavonol 4-reductase1.1.1.2190.459
3k4s0MOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.459
1pj6FOLDimethylglycine oxidase1.5.3.100.458
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.458
2vbpVB1Isopenicillin N synthase1.21.3.10.458
3uzzTES3-oxo-5-beta-steroid 4-dehydrogenase/0.458
4drjRAPSerine/threonine-protein kinase mTOR2.7.11.10.458
4drjRAPPeptidyl-prolyl cis-trans isomerase FKBP45.2.1.80.458
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.458
4hfr14MCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.458
4lcw1VYMajor histocompatibility complex class I-related gene protein/0.458
1fapRAPPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.457
1fapRAPSerine/threonine-protein kinase mTOR2.7.11.10.457
2ea4F79Methionine aminopeptidase 2/0.457
2v5uFMNFlavodoxin/0.457
3a1l2CCCytochrome P450/0.457
3hiiPNTAmiloride-sensitive amine oxidase [copper-containing]/0.457
1rvvINI6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.456
2r2lPB9Protein farnesyltransferase subunit beta2.5.1.580.456
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.456
3v35NTIAldose reductase1.1.1.210.456
4bftZVTPantothenate kinase2.7.1.330.456
4xwtU5PRibonuclease J/0.456
1c7oPPGHemolysin/0.455
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.455
1q9mROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.455
2fapRADPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.455
2fapRADSerine/threonine-protein kinase mTOR2.7.11.10.455
2pdkSBIAldose reductase1.1.1.210.455
2y6fM9FIsopenicillin N synthase1.21.3.10.455
3af1GDPPantothenate kinase2.7.1.330.455
3n0hTOPDihydrofolate reductase1.5.1.30.455
3zkuHCVIsopenicillin N synthase1.21.3.10.455
4gh6LUOHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.455
4jq4IMNAldo-keto reductase family 1 member C2/0.455
1o6qR17Squalene--hopene cyclase4.2.1.1290.454
2bjsACVIsopenicillin N synthase1.21.3.10.454
2ourCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.454
4u140HKMuscarinic acetylcholine receptor M3/0.454
2hzqSTRApolipoprotein D/0.453
2tplHPPTyrosine phenol-lyase4.1.99.20.453
3r8hZOMAldo-keto reductase family 1 member C3/0.453
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.452
1t47NTD4-hydroxyphenylpyruvate dioxygenase1.13.11.270.452
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.452
2jb4A14Isopenicillin N synthase1.21.3.10.452
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.452
3hxeBD8Geranylgeranyl transferase type-2 subunit beta2.5.1.600.452
3q9bB3NAcetylpolyamine amidohydrolase/0.452
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.452
4bfxZVXPantothenate kinase2.7.1.330.452
2w3mFOLDihydrofolate reductase1.5.1.30.451
3u2cSUZAldose reductase1.1.1.210.451
3uweVJJAldo-keto reductase family 1 member C3/0.451
3uzxAOM3-oxo-5-beta-steroid 4-dehydrogenase/0.451
4zzi1NSNAD-dependent protein deacetylase sirtuin-13.5.10.451
4u163C0Muscarinic acetylcholine receptor M3/0.451
1bk0ACVIsopenicillin N synthase1.21.3.10.450
2fm0M98cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
2rd2QSIGlutamine--tRNA ligase6.1.1.180.450
2xupTZ5Acetylcholinesterase3.1.1.70.450
2zsdCOAPantothenate kinase2.7.1.330.450
3g4kROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
4lsjLSJGlucocorticoid receptor/0.450
1ry8RUTAldo-keto reductase family 1 member C3/0.449
1y2d4DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449
2cbqTH2Neocarzinostatin/0.449
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.449
4f1l0RYPoly [ADP-ribose] polymerase 142.4.2.300.449
4kmzFOLFolate receptor beta/0.449
3uonQNBMuscarinic acetylcholine receptor M2/0.449
1mkdZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.448
1oc1ASVIsopenicillin N synthase1.21.3.10.448
1w06W05Isopenicillin N synthase1.21.3.10.448
3hbfMYCFlavonoid 3-O-glucosyltransferase2.4.10.448
3p2vDOYAldose reductase1.1.1.210.448
4araC56Acetylcholinesterase3.1.1.70.448
4ey7E20Acetylcholinesterase3.1.1.70.448
4fcb0T7cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
5fd8A5APutative carboxypeptidase yocD/0.448
2ga2A19Methionine aminopeptidase 2/0.447
2w6cBM4Acetylcholinesterase3.1.1.70.447
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.447
3g58988cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.447
4oex5EOcGMP-specific 3',5'-cyclic phosphodiesterase/0.447
4stdBFSScytalone dehydratase4.2.1.940.447
1e66HUXAcetylcholinesterase3.1.1.70.446
1hb1OCVIsopenicillin N synthase1.21.3.10.446
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.446
1q6nP90Tyrosine-protein phosphatase non-receptor type 13.1.3.480.446
1synF89Thymidylate synthase/0.446
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.446
1w6jR71Lanosterol synthase5.4.99.70.446
1x8lOXRRetinol dehydratase/0.446
2f3815MAldo-keto reductase family 1 member C3/0.446
2hctNMNADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 13.2.2.60.446
3n3zIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.446
4a312CBGlycylpeptide N-tetradecanoyltransferase/0.446
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.446
4dbs0HVAldo-keto reductase family 1 member C3/0.446
1hb3SCVIsopenicillin N synthase1.21.3.10.445
1xorZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.445
1y60H4M5,6,7,8-tetrahydromethanopterin hydro-lyase4.2.1.1470.445
1zz1SHHHistone deacetylase-like amidohydrolase3.5.10.445
2a57CRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.445
2xuqTZ4Acetylcholinesterase3.1.1.70.445
2zsbADPPantothenate kinase2.7.1.330.445
3gmd2M3Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.445
3zoiM2WIsopenicillin N synthase1.21.3.10.445
4drhRAPSerine/threonine-protein kinase mTOR2.7.11.10.445
4drhRAPPeptidyl-prolyl cis-trans isomerase FKBP55.2.1.80.445
8catNDPCatalase1.11.1.60.445
1esmCOAPantothenate kinase2.7.1.330.444
1h22E10Acetylcholinesterase3.1.1.70.444
1kyxCRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.444
1ndzFR5Adenosine deaminase3.5.4.40.444
1tfz8694-hydroxyphenylpyruvate dioxygenase1.13.11.270.444
1xngDNDNH(3)-dependent NAD(+) synthetase6.3.1.50.444
1xomCIOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.444
2getCOKPantothenate kinase2.7.1.330.444
2ipjFFAAldo-keto reductase family 1 member C2/0.444
2y60M8FIsopenicillin N synthase1.21.3.10.444
3sn7540cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.444
3uzxAOX3-oxo-5-beta-steroid 4-dehydrogenase/0.444
4gn6TYLLactoperoxidase1.11.1.70.444
4kq6DLZ6,7-dimethyl-8-ribityllumazine synthase/0.444
4paaTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.444
1el3I84Aldose reductase1.1.1.210.443
1umcTDP2-oxoisovalerate dehydrogenase subunit alpha1.2.4.40.443
1umcTDP2-oxoisovalerate dehydrogenase subunit beta1.2.4.40.443
1v08NTZ4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.443
1xf0ASDAldo-keto reductase family 1 member C3/0.443
2aouCQAHistamine N-methyltransferase2.1.1.80.443
2gpvOHTEstrogen-related receptor gamma/0.443
3dylIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.443
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.443
4b2gV1NUncharacterized protein/0.443
4kp61S1cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.443
4l4v1VYMajor histocompatibility complex class I-related gene protein/0.443
4wevSUZAldo-keto reductase family 1 member B101.1.10.443
1qiqACCIsopenicillin N synthase1.21.3.10.442
3s3gTLTAldose reductase1.1.1.210.442
4e0u0MVCyclic dipeptide N-prenyltransferase/0.442
5d5aCAUBeta-2 adrenergic receptor/0.442
5jqhCAUBeta-2 adrenergic receptor/0.442
3nyaJTZBeta-2 adrenergic receptor/0.442
1u1jC2F5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 12.1.1.140.441
1udtVIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.441
2xuhTZ4Acetylcholinesterase3.1.1.70.441
3af4GCPPantothenate kinase2.7.1.330.441
3br2DEQHTH-type transcriptional regulator QacR/0.441
3hxfBD9Geranylgeranyl transferase type-2 subunit beta2.5.1.600.441
3ojgHL4Phosphotriesterase/0.441
3pz3PZ3Geranylgeranyl transferase type-2 subunit beta2.5.1.600.441
4gts7TPGeranylgeranyl transferase type-2 subunit beta2.5.1.600.441
4kebFOLDihydrofolate reductase1.5.1.30.441
4lrhFOLFolate receptor alpha/0.441
1ihiIU5Aldo-keto reductase family 1 member C2/0.440
1odcA8BAcetylcholinesterase3.1.1.70.440
1pj7FFODimethylglycine oxidase1.5.3.100.440
1ps9MDE2,4-dienoyl-CoA reductase1.3.1.340.440
1u65CP0Acetylcholinesterase3.1.1.70.440
2d06ESTSulfotransferase 1A12.8.2.10.440
2vqbNAPPutative flavin-containing monooxygenase/0.440
2xtbKRMAdenosine kinase, putative/0.440
3nxtD2EDihydrofolate reductase1.5.1.30.440
3ocw3AMLipoprotein E/0.440
3upr1KXHLA class I histocompatibility antigen, B-57 alpha chain/0.440
4a2zVIQGlycylpeptide N-tetradecanoyltransferase/0.440
4c1iEH9cGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.440
4gtr7TRProtein farnesyltransferase subunit beta2.5.1.580.440
4jq3ZOMAldo-keto reductase family 1 member C2/0.440
4myq19TcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.440
4pnmNU1Tankyrase-22.4.2.300.440
4psbGA3Cytokinin-specific binding protein/0.440