Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2qk8 | MTX | Dihydrofolate reductase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 2qk8 | MTX | Dihydrofolate reductase | / | 1.000 | |
| 4ele | 31I | Dihydrofolate reductase | / | 0.647 | |
| 4elg | 52J | Dihydrofolate reductase | / | 0.624 | |
| 3fl8 | RAR | Dihydrofolate reductase | / | 0.621 | |
| 4elb | 34S | Dihydrofolate reductase | / | 0.619 | |
| 3och | 2MX | Dihydrofolate reductase | 1.5.1.3 | 0.605 | |
| 4elf | 35I | Dihydrofolate reductase | / | 0.590 | |
| 2drc | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.588 | |
| 4dfr | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.586 | |
| 4elh | 53I | Dihydrofolate reductase | / | 0.584 | |
| 1tdr | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.582 | |
| 1dra | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.578 | |
| 1drb | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.575 | |
| 2w9s | TOP | Dihydrofolate reductase type 1 from Tn4003 | 1.5.1.3 | 0.575 | |
| 1rc4 | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.574 | |
| 1dds | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.571 | |
| 4elb | 34R | Dihydrofolate reductase | / | 0.568 | |
| 1dyj | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.565 | |
| 1ddr | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.560 | |
| 3drc | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.559 | |
| 3fl9 | TOP | Dihydrofolate reductase | / | 0.558 | |
| 4xe6 | 06U | Dihydrofolate reductase | 1.5.1.3 | 0.558 | |
| 1rb3 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.554 | |
| 1rf7 | DHF | Dihydrofolate reductase | 1.5.1.3 | 0.554 | |
| 1re7 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.553 | |
| 1jol | FFO | Dihydrofolate reductase | 1.5.1.3 | 0.551 | |
| 1dis | BDM | Dihydrofolate reductase | 1.5.1.3 | 0.544 | |
| 1diu | BDM | Dihydrofolate reductase | 1.5.1.3 | 0.542 | |
| 5hi6 | MTX | Dihydrofolate reductase | / | 0.541 | |
| 1dhj | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.539 | |
| 1jom | FFO | Dihydrofolate reductase | 1.5.1.3 | 0.538 | |
| 4cd2 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.531 | |
| 1bzf | TMQ | Dihydrofolate reductase | 1.5.1.3 | 0.527 | |
| 4ej1 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.521 | |
| 4qi9 | MTX | Dihydrofolate reductase | / | 0.514 | |
| 2hm9 | TRR | Dihydrofolate reductase | 1.5.1.3 | 0.509 | |
| 3eig | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.509 | |
| 1rx8 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.504 | |
| 3s7a | 684 | Dihydrofolate reductase | 1.5.1.3 | 0.504 | |
| 5ccc | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.504 | |
| 4j6b | PLO | Cytochrome P450 monooxygenase | / | 0.501 | |
| 3t8x | T8X | T-cell surface glycoprotein CD1b | / | 0.495 | |
| 3sru | Q26 | Dihydrofolate reductase | 1.5.1.3 | 0.494 | |
| 1dhf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.493 | |
| 2w9h | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.493 | |
| 1rg7 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.492 | |
| 3sa1 | 6DR | Dihydrofolate reductase | / | 0.491 | |
| 4x5j | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.490 | |
| 4ryv | ZEA | Protein LlR18A | / | 0.489 | |
| 4nb6 | 444 | Nuclear receptor ROR-gamma | / | 0.487 | |
| 4x5i | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.486 | |
| 1uyf | PU1 | Heat shock protein HSP 90-alpha | / | 0.484 | |
| 1rx7 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.481 | |
| 4jbt | ASD | Cytochrome P450 monooxygenase | / | 0.481 | |
| 1rx3 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.480 | |
| 2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.480 | |
| 1drf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.479 | |
| 4g95 | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.479 | |
| 4r20 | AER | Cytochrome P450 family 17 polypeptide 2 | / | 0.479 | |
| 1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.478 | |
| 1uyd | PU8 | Heat shock protein HSP 90-alpha | / | 0.477 | |
| 3fy9 | XCF | Dihydrofolate reductase | 1.5.1.3 | 0.477 | |
| 4q73 | FAD | Bifunctional protein PutA | / | 0.477 | |
| 1rb2 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.476 | |
| 2q5g | 1FA | Peroxisome proliferator-activated receptor delta | / | 0.476 | |
| 3fyw | XCF | Dihydrofolate reductase | 1.5.1.3 | 0.476 | |
| 4jib | 1L6 | cGMP-dependent 3',5'-cyclic phosphodiesterase | 3.1.4.17 | 0.476 | |
| 3c0g | 3AM | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.475 | |
| 3jwc | EKB | Dihydrofolate reductase | / | 0.474 | |
| 3srq | Q19 | Dihydrofolate reductase | 1.5.1.3 | 0.474 | |
| 4bb3 | KKA | Isopenicillin N synthase | 1.21.3.1 | 0.474 | |
| 4j53 | 1J4 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.474 | |
| 1mkd | ZAR | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.473 | |
| 3nwx | KVS | Gag-Pol polyprotein | 3.4.23.16 | 0.473 | |
| 3zei | AWH | O-acetylserine sulfhydrylase | / | 0.471 | |
| 4fv9 | E71 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.471 | |
| 1ia4 | TQ6 | Dihydrofolate reductase | 1.5.1.3 | 0.470 | |
| 2d0k | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.470 | |
| 3jw5 | TOP | Dihydrofolate reductase | / | 0.470 | |
| 4fv4 | EK7 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.470 | |
| 3jwm | 5WB | Dihydrofolate reductase | / | 0.469 | |
| 3q44 | D50 | M1 family aminopeptidase | 3.4.11 | 0.469 | |
| 2qd4 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.468 | |
| 4fgh | 0U6 | Dihydrofolate reductase | 1.5.1.3 | 0.468 | |
| 4i1n | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.468 | |
| 1kbo | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.467 | |
| 1uye | PU9 | Heat shock protein HSP 90-alpha | / | 0.467 | |
| 3l8s | BFF | Mitogen-activated protein kinase 14 | / | 0.467 | |
| 1ia3 | TQ5 | Dihydrofolate reductase | 1.5.1.3 | 0.466 | |
| 1zhz | ERG | Oxysterol-binding protein homolog 4 | / | 0.466 | |
| 4b12 | NHW | Glycylpeptide N-tetradecanoyltransferase | / | 0.466 | |
| 4j6c | STR | Cytochrome P450 monooxygenase | / | 0.466 | |
| 4j6d | TES | Cytochrome P450 monooxygenase | / | 0.466 | |
| 1xdd | AAY | Integrin alpha-L | / | 0.465 | |
| 1pkf | EPD | Epothilone C/D epoxidase | 1.14 | 0.464 | |
| 1rd7 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
| 3gc9 | B45 | Mitogen-activated protein kinase 11 | 2.7.11.24 | 0.464 | |
| 1c6y | MK1 | Protease | / | 0.463 | |
| 1rx6 | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.463 | |
| 2abb | FMN | Pentaerythritol tetranitrate reductase | / | 0.463 | |
| 2ji6 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.463 | |
| 3sa2 | 7DR | Dihydrofolate reductase | / | 0.463 | |
| 1yw2 | PGJ | Mitogen-activated protein kinase 14 | / | 0.462 | |
| 2h42 | VIA | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.462 | |
| 3atz | FMN | Prostaglandin F2a synthase | / | 0.462 | |
| 3fyv | XCF | Dihydrofolate reductase | 1.5.1.3 | 0.462 | |
| 3oqf | S51 | Renin | 3.4.23.15 | 0.462 | |
| 3qaa | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.462 | |
| 3qly | 55V | Uncharacterized protein | / | 0.462 | |
| 3sh2 | 5DR | Dihydrofolate reductase | 1.5.1.3 | 0.462 | |
| 2i4p | DRH | Peroxisome proliferator-activated receptor gamma | / | 0.461 | |
| 3oaf | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.461 | |
| 3s3v | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.461 | |
| 3tqh | NDP | Quinone oxidoreductase | / | 0.461 | |
| 3vt7 | VDX | Vitamin D3 receptor | / | 0.461 | |
| 4hy6 | FJ1 | Heat shock protein HSP 90-alpha | / | 0.461 | |
| 1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.460 | |
| 3eek | 53S | Uncharacterized protein | / | 0.460 | |
| 3ruk | AER | Steroid 17-alpha-hydroxylase/17,20 lyase | / | 0.460 | |
| 3w1w | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.460 | |
| 4mv1 | ADP | Biotin carboxylase | 6.3.4.14 | 0.460 | |
| 4nh8 | 2LC | Heat shock protein HSP 90-alpha | / | 0.460 | |
| 1blz | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.459 | |
| 1uym | PU3 | Heat shock protein HSP 90-beta | / | 0.459 | |
| 1yqj | 6NP | Mitogen-activated protein kinase 14 | / | 0.459 | |
| 2uag | UMA | UDP-N-acetylmuramoylalanine--D-glutamate ligase | 6.3.2.9 | 0.459 | |
| 2zza | FOL | Dihydrofolate reductase | / | 0.459 | |
| 3frf | XCF | Dihydrofolate reductase | 1.5.1.3 | 0.459 | |
| 3l0l | HC3 | Nuclear receptor ROR-gamma | / | 0.459 | |
| 4bii | PYW | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.459 | |
| 4h98 | 14Q | Uncharacterized protein | / | 0.459 | |
| 4uyf | 73B | Bromodomain-containing protein 2 | / | 0.459 | |
| 1bw9 | NAD | Phenylalanine dehydrogenase | / | 0.458 | |
| 2fzi | DH3 | Dihydrofolate reductase | 1.5.1.3 | 0.458 | |
| 2uxo | TAC | HTH-type transcriptional regulator TtgR | / | 0.458 | |
| 3jsu | KA5 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.458 | |
| 3p8i | FMN | Pentaerythritol tetranitrate reductase | / | 0.458 | |
| 3sai | 9DR | Dihydrofolate reductase | / | 0.458 | |
| 3tqb | FOL | Dihydrofolate reductase | / | 0.458 | |
| 4jlj | 1NM | Deoxycytidine kinase | 2.7.1.74 | 0.458 | |
| 4kne | 1CY | Dihydrofolate reductase | 1.5.1.3 | 0.458 | |
| 4u9z | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.458 | |
| 1cqp | 803 | Integrin alpha-L | / | 0.457 | |
| 1d4a | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.457 | |
| 1ep3 | FAD | Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit | / | 0.457 | |
| 1ra3 | NAP | Dihydrofolate reductase | 1.5.1.3 | 0.457 | |
| 2fwy | H64 | Heat shock protein HSP 90-alpha | / | 0.457 | |
| 4feu | 537 | Aminoglycoside 3'-phosphotransferase AphA1-IAB | / | 0.457 | |
| 1dyh | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.456 | |
| 1e26 | GPB | Dihydrofolate reductase | 1.5.1.3 | 0.456 | |
| 1q5d | EPB | Epothilone C/D epoxidase | 1.14 | 0.456 | |
| 1uyh | PU0 | Heat shock protein HSP 90-alpha | / | 0.456 | |
| 2hrc | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.456 | |
| 3ia4 | MTX | Dihydrofolate reductase | / | 0.456 | |
| 3m08 | RAR | Dihydrofolate reductase | 1.5.1.3 | 0.456 | |
| 3nu9 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.456 | |
| 3prf | FP3 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.456 | |
| 3zoi | M2W | Isopenicillin N synthase | 1.21.3.1 | 0.456 | |
| 4b5o | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.456 | |
| 4e2b | FMN | Dehydrogenase | / | 0.456 | |
| 4fk3 | 325 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.456 | |
| 5cc9 | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.456 | |
| 1ozh | HE3 | Acetolactate synthase, catabolic | 2.2.1.6 | 0.455 | |
| 1rx4 | DDF | Dihydrofolate reductase | 1.5.1.3 | 0.455 | |
| 2fzh | DH1 | Dihydrofolate reductase | 1.5.1.3 | 0.455 | |
| 2ij7 | TPF | Mycocyclosin synthase | 1.14.21.9 | 0.455 | |
| 3p8j | FMN | Pentaerythritol tetranitrate reductase | / | 0.455 | |
| 3p9t | TCL | Repressor | / | 0.455 | |
| 4a32 | 2CD | Glycylpeptide N-tetradecanoyltransferase | / | 0.455 | |
| 4ips | 1G4 | Mycocyclosin synthase | 1.14.21.9 | 0.455 | |
| 4kzo | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.455 | |
| 4mvh | 2F5 | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.455 | |
| 1uy6 | PU3 | Heat shock protein HSP 90-alpha | / | 0.454 | |
| 2cig | 1DG | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 2f4b | EHA | Peroxisome proliferator-activated receptor gamma | / | 0.454 | |
| 2po7 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.454 | |
| 2w9g | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 3cgf | JNF | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.454 | |
| 3cv9 | VDX | Vitamin D3 dihydroxylase | / | 0.454 | |
| 3irm | 1CY | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.454 | |
| 3kfs | 3TL | Gag-Pol polyprotein | / | 0.454 | |
| 3ogq | AB1 | Pol polyprotein | / | 0.454 | |
| 3u8h | BHP | Phospholipase A2, membrane associated | / | 0.454 | |
| 4c4j | X21 | Dual specificity protein kinase TTK | 2.7.12.1 | 0.454 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.454 | |
| 4nx6 | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.454 | |
| 1adf | TAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.453 | |
| 1q41 | IXM | Glycogen synthase kinase-3 beta | 2.7.11.26 | 0.453 | |
| 2jb4 | A14 | Isopenicillin N synthase | 1.21.3.1 | 0.453 | |
| 2vbd | V10 | Isopenicillin N synthase | 1.21.3.1 | 0.453 | |
| 3f69 | XDR | Serine/threonine-protein kinase PknB | 2.7.11.1 | 0.453 | |
| 3nwq | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.453 | |
| 3p67 | FMN | Pentaerythritol tetranitrate reductase | / | 0.453 | |
| 4b1f | KRH | Glutamate racemase | / | 0.453 | |
| 4cx3 | HW8 | Nitric oxide synthase, brain | 1.14.13.39 | 0.453 | |
| 4f4d | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.453 | |
| 1gg5 | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.452 | |
| 1uzw | CDH | Isopenicillin N synthase | 1.21.3.1 | 0.452 | |
| 2nry | STU | Interleukin-1 receptor-associated kinase 4 | 2.7.11.1 | 0.452 | |
| 2uxp | CLM | HTH-type transcriptional regulator TtgR | / | 0.452 | |
| 3nxe | 2NC | Protease | / | 0.452 | |
| 3vwe | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.452 | |
| 5ce3 | ADP | Protein kinase YopO | / | 0.452 | |
| 5hwq | CAA | Hydroxymethylglutaryl-CoA synthase | / | 0.452 | |
| 1nzy | BCA | 4-chlorobenzoyl coenzyme A dehalogenase | 3.8.1.7 | 0.451 | |
| 2y1o | T26 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | 6.3.2.9 | 0.451 | |
| 2ykc | YKC | Heat shock protein HSP 90-alpha | / | 0.451 | |
| 3is9 | AC7 | Gag-Pol polyprotein | 2.7.7.49 | 0.451 | |
| 3mdv | CL6 | Cholesterol 24-hydroxylase | / | 0.451 | |
| 4c7k | NAP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.451 | |
| 4nie | NBH | Nuclear receptor ROR-gamma | / | 0.451 | |
| 1c70 | L75 | Protease | / | 0.450 | |
| 1dr3 | HBI | Dihydrofolate reductase | 1.5.1.3 | 0.450 | |
| 1iid | NHM | Glycylpeptide N-tetradecanoyltransferase | 2.3.1.97 | 0.450 | |
| 1uae | UD1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | / | 0.450 | |
| 2o65 | MYF | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.450 | |
| 2p4y | C03 | Peroxisome proliferator-activated receptor gamma | / | 0.450 | |
| 3srr | Q20 | Dihydrofolate reductase | 1.5.1.3 | 0.450 | |
| 3ucb | 017 | Gag-Pol polyprotein | / | 0.450 | |
| 3zc3 | NAP | Ferredoxin--NADP reductase | 1.18.1.2 | 0.450 | |
| 4lux | QJ8 | Nitric oxide synthase, brain | 1.14.13.39 | 0.450 | |
| 1jio | DEB | 6-deoxyerythronolide B hydroxylase | / | 0.449 | |
| 1q6p | 213 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 0.449 | |
| 1zeo | C01 | Peroxisome proliferator-activated receptor gamma | / | 0.449 | |
| 2qnq | QN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.449 | |
| 2zb8 | IMN | Prostaglandin reductase 2 | 1.3.1.48 | 0.449 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.449 | |
| 3gfb | NAD | L-threonine 3-dehydrogenase | / | 0.449 | |
| 3srw | Q27 | Dihydrofolate reductase | 1.5.1.3 | 0.449 | |
| 3vt8 | YI3 | Vitamin D3 receptor | / | 0.449 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.449 | |
| 4h3j | 10W | Beta-secretase 1 | 3.4.23.46 | 0.449 | |
| 4hni | 16W | Casein kinase I isoform epsilon | 2.7.11.1 | 0.449 | |
| 4r21 | STR | Cytochrome P450 family 17 polypeptide 2 | / | 0.449 | |
| 4y12 | AGS | Serine/threonine-protein kinase PknG | 2.7.11.1 | 0.449 | |
| 2e9a | B28 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | 2.5.1.31 | 0.448 | |
| 2h96 | 893 | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.448 | |
| 2i4z | DRH | Peroxisome proliferator-activated receptor gamma | / | 0.448 | |
| 2j9l | ATP | H(+)/Cl(-) exchange transporter 5 | / | 0.448 | |
| 2uxh | QUE | HTH-type transcriptional regulator TtgR | / | 0.448 | |
| 2uxz | HI1 | Gag-Pol polyprotein | 3.4.23.16 | 0.448 | |
| 3ctj | 320 | Hepatocyte growth factor receptor | 2.7.10.1 | 0.448 | |
| 3dat | MTX | Dihydrofolate reductase | / | 0.448 | |
| 3k5u | PFQ | Aurora kinase A | 2.7.11.1 | 0.448 | |
| 4bf2 | STU | Mitogen-activated protein kinase kinase kinase 5 | 2.7.11.25 | 0.448 | |
| 4l9k | EHF | Serum albumin | / | 0.448 | |
| 1guf | NDP | Enoyl-[acyl-carrier-protein] reductase 1, mitochondrial | 1.3.1.10 | 0.447 | |
| 1hdc | CBO | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | 1.1.1.53 | 0.447 | |
| 1mru | AGS | Serine/threonine-protein kinase PknB | 2.7.11.1 | 0.447 | |
| 1zdw | FLV | Prenyltransferase | / | 0.447 | |
| 2h44 | 7CA | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.447 | |
| 2om9 | AJA | Peroxisome proliferator-activated receptor gamma | / | 0.447 | |
| 2yki | YKI | Heat shock protein HSP 90-alpha | / | 0.447 | |
| 3tq9 | MTX | Dihydrofolate reductase | / | 0.447 | |
| 3vf7 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.447 | |
| 3vt9 | YI4 | Vitamin D3 receptor | / | 0.447 | |
| 4dpd | DHF | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.447 | |
| 4fv8 | E63 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.447 | |
| 4h1e | 10J | Beta-secretase 1 | 3.4.23.46 | 0.447 | |
| 4h8n | NDP | NADPH-dependent conjugated polyketone reductase C2 | / | 0.447 | |
| 4hkf | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.447 | |
| 4qgi | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.447 | |
| 1a72 | PAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.446 | |
| 1bdr | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.446 | |
| 1bws | NDP | GDP-L-fucose synthase | / | 0.446 | |
| 1iyz | NDP | Probable quinone oxidoreductase | / | 0.446 | |
| 1kkq | 471 | Peroxisome proliferator-activated receptor alpha | / | 0.446 | |
| 1olm | VTQ | SEC14-like protein 2 | / | 0.446 | |
| 1ps9 | MDE | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.446 | |
| 1q4x | G24 | Thyroid hormone receptor beta | / | 0.446 | |
| 1qlh | NAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.446 | |
| 1s3u | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.446 | |
| 1tll | FAD | Nitric oxide synthase, brain | 1.14.13.39 | 0.446 | |
| 2chx | 090 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.446 | |
| 2o0u | C0M | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.446 | |
| 2q28 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.446 | |
| 2x19 | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.446 | |
| 2yke | YKE | Heat shock protein HSP 90-alpha | / | 0.446 | |
| 2zdt | 46C | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.446 | |
| 3frd | DHF | Dihydrofolate reductase | 1.5.1.3 | 0.446 | |
| 3g6z | A7T | Renin | 3.4.23.15 | 0.446 | |
| 3owa | FAD | Acyl-CoA dehydrogenase | / | 0.446 | |
| 3pe6 | ZYH | Monoglyceride lipase | / | 0.446 | |
| 3t3c | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.446 | |
| 4c58 | 824 | Cyclin-G-associated kinase | 2.7.11.1 | 0.446 | |
| 4eev | L1X | Hepatocyte growth factor receptor | 2.7.10.1 | 0.446 | |
| 4ezj | 0SC | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.446 | |
| 4heu | 15J | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.446 | |
| 4o4f | ATP | Kinase | / | 0.446 | |
| 5dos | ATP | Aurora kinase A | 2.7.11.1 | 0.446 | |
| 1dyi | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.445 | |
| 1hos | PHP | Gag-Pol polyprotein | / | 0.445 | |
| 1nzd | UPG | DNA beta-glucosyltransferase | / | 0.445 | |
| 1uy8 | PU5 | Heat shock protein HSP 90-alpha | / | 0.445 | |
| 1w5x | BE5 | Gag-Pol polyprotein | 3.4.23.16 | 0.445 | |
| 2gqg | 1N1 | Tyrosine-protein kinase ABL1 | 2.7.10.2 | 0.445 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.445 | |
| 2pnj | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.445 | |
| 2q63 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.445 | |
| 2qd7 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.445 | |
| 2yjx | YJX | Heat shock protein HSP 90-alpha | / | 0.445 | |
| 2zba | ZBA | Trichothecene 3-O-acetyltransferase | / | 0.445 | |
| 3a1n | NAD | NDP-sugar epimerase | / | 0.445 | |
| 3a99 | ANP | Serine/threonine-protein kinase pim-1 | 2.7.11.1 | 0.445 | |
| 4a33 | MYA | Glycylpeptide N-tetradecanoyltransferase | / | 0.445 | |
| 4c4f | 7CE | Dual specificity protein kinase TTK | 2.7.12.1 | 0.445 | |
| 4iae | 1DX | Alr2278 protein | / | 0.445 | |
| 4ipw | 1G7 | Mycocyclosin synthase | 1.14.21.9 | 0.445 | |
| 4o70 | 1QK | Bromodomain-containing protein 4 | / | 0.445 | |
| 2bu9 | HFV | Isopenicillin N synthase | 1.21.3.1 | 0.444 | |
| 2dr3 | ADP | UPF0273 protein PH0284 | / | 0.444 | |
| 2q59 | 240 | Peroxisome proliferator-activated receptor gamma | / | 0.444 | |
| 3d1y | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.444 | |
| 3dau | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 3o6o | 94M | Heat shock protein 83 | / | 0.444 | |
| 3tda | PN0 | Cytochrome P450 2D6 | / | 0.444 | |
| 4c68 | NHW | Glycylpeptide N-tetradecanoyltransferase | / | 0.444 | |
| 4g34 | 924 | Eukaryotic translation initiation factor 2-alpha kinase 3 | 2.7.11.1 | 0.444 | |
| 5adh | APR | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.444 | |
| 1ffi | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 1hb1 | OCV | Isopenicillin N synthase | 1.21.3.1 | 0.443 | |
| 1n71 | COA | Aac(6')-Ii protein | / | 0.443 | |
| 1t0l | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.443 | |
| 1y60 | H4M | 5,6,7,8-tetrahydromethanopterin hydro-lyase | 4.2.1.147 | 0.443 | |
| 2exc | JNK | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.443 | |
| 2p3c | 3TL | Protease | / | 0.443 | |
| 3ajr | NAD | NDP-sugar epimerase | / | 0.443 | |
| 3bac | 3B9 | DNA ligase | / | 0.443 | |
| 3el4 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 3el9 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 3g5s | FAD | Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO | / | 0.443 | |
| 3ggu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.443 | |
| 3ix9 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 3qpn | PFK | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.443 | |
| 3t2k | FAD | Sulfide-quinone reductase | / | 0.443 | |
| 3t2y | FAD | Sulfide-quinone reductase | / | 0.443 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.443 | |
| 4fgg | 0U5 | Dihydrofolate reductase | 1.5.1.3 | 0.443 | |
| 4fjz | 4FJ | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.443 | |
| 4hfr | 14M | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.443 | |
| 4iq7 | 1G9 | Mycocyclosin synthase | 1.14.21.9 | 0.443 | |
| 4yr9 | NAD | L-threonine 3-dehydrogenase, mitochondrial | 1.1.1.103 | 0.443 | |
| 1hb3 | SCV | Isopenicillin N synthase | 1.21.3.1 | 0.442 | |
| 1pmn | 984 | Mitogen-activated protein kinase 10 | 2.7.11.24 | 0.442 | |
| 1udt | VIA | cGMP-specific 3',5'-cyclic phosphodiesterase | / | 0.442 | |
| 1yvj | 4ST | Tyrosine-protein kinase JAK3 | 2.7.10.2 | 0.442 | |
| 2bqv | A1A | Protease | / | 0.442 | |
| 2e9d | B76 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | 2.5.1.31 | 0.442 | |
| 2pyn | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 2q64 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 2qo4 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 0.442 | |
| 2wi7 | 2KL | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 3gcp | SB2 | Mitogen-activated protein kinase 14 | / | 0.442 | |
| 3ggs | 2FD | Purine nucleoside phosphorylase | 2.4.2.1 | 0.442 | |
| 3hz1 | 37D | Heat shock protein HSP 90-alpha | / | 0.442 | |
| 3rdq | DTB | Streptavidin | / | 0.442 | |
| 3slk | NDP | Polyketide synthase extender module 2 | / | 0.442 | |
| 3wfj | NAD | 2-dehydropantoate 2-reductase | / | 0.442 | |
| 4g3j | VNT | Lanosterol 14-alpha-demethylase | / | 0.442 | |
| 4hf4 | 15H | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.442 | |
| 4kba | 1QM | Casein kinase I isoform delta | 2.7.11.1 | 0.442 | |
| 4ktl | 1CQ | Cytochrome P450 | / | 0.442 | |
| 4muw | 2F4 | cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A | 3.1.4.17 | 0.442 | |
| 4ucn | MYA | Glycylpeptide N-tetradecanoyltransferase | / | 0.442 | |
| 1aj8 | COA | Citrate synthase | / | 0.441 | |
| 1jip | KTN | 6-deoxyerythronolide B hydroxylase | / | 0.441 | |
| 1vyr | FMN | Pentaerythritol tetranitrate reductase | / | 0.441 | |
| 1zhw | HC2 | Oxysterol-binding protein homolog 4 | / | 0.441 | |
| 2e9c | B75 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | 2.5.1.31 | 0.441 | |
| 2nnp | ROC | Protease | / | 0.441 | |
| 2pg0 | FAD | Acyl-CoA dehydrogenase | / | 0.441 | |
| 2yac | 937 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.441 | |
| 3a60 | STU | Ribosomal protein S6 kinase beta-1 | 2.7.11.1 | 0.441 | |
| 3flk | NAI | Tartrate dehydrogenase/decarboxylase | 1.1.1.93 | 0.441 | |
| 3fzs | B96 | Protein-tyrosine kinase 2-beta | 2.7.10.2 | 0.441 | |
| 3l08 | ZIG | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.441 | |
| 3stx | BKA | Methylketone synthase I | / | 0.441 | |
| 3u9e | COA | Lmo1369 protein | / | 0.441 | |
| 3zep | 1NX | Tyrosine-protein kinase JAK3 | 2.7.10.2 | 0.441 | |
| 4bj9 | UHB | Tankyrase-2 | 2.4.2.30 | 0.441 | |
| 4fex | 0TO | Aminoglycoside 3'-phosphotransferase AphA1-IAB | / | 0.441 | |
| 4flh | 14K | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.441 | |
| 4fny | I3K | ALK tyrosine kinase receptor | 2.7.10.1 | 0.441 | |
| 4iar | ERM | 5-hydroxytryptamine receptor 1B | / | 0.441 | |
| 4imt | 1EW | Nitric oxide synthase, brain | 1.14.13.39 | 0.441 | |
| 5cno | ANP | Epidermal growth factor receptor | 2.7.10.1 | 0.441 | |
| 5dp2 | NAP | CurF | / | 0.441 | |
| 1a8g | 2Z4 | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 1m13 | HYF | Nuclear receptor subfamily 1 group I member 2 | / | 0.440 | |
| 1s3v | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 1u8v | FAD | 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase | / | 0.440 | |
| 1xjj | DGT | Vitamin B12-dependent ribonucleotide reductase | / | 0.440 | |
| 1xl2 | 189 | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 1xom | CIO | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.440 | |
| 2fm5 | M99 | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.440 | |
| 2i4j | DRJ | Peroxisome proliferator-activated receptor gamma | / | 0.440 | |
| 2nnk | ROC | Protease | / | 0.440 | |
| 2qd3 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.440 | |
| 2qi3 | MZ5 | Gag-Pol polyprotein | / | 0.440 | |
| 2r43 | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 2wpx | ACO | Orf14 | / | 0.440 | |
| 2zjw | REF | Casein kinase II subunit alpha | 2.7.11.1 | 0.440 | |
| 3bqd | DAY | Glucocorticoid receptor | / | 0.440 | |
| 3dfr | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 3eku | CY9 | Actin-5C | / | 0.440 | |
| 3fre | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 3kfr | 3TL | Gag-Pol polyprotein | / | 0.440 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.440 | |
| 3n0h | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 3orm | AGS | Serine/threonine protein kinase | / | 0.440 | |
| 3p62 | FMN | Pentaerythritol tetranitrate reductase | / | 0.440 | |
| 3qts | X46 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.440 | |
| 3rv3 | ADP | Biotin carboxylase | 6.3.4.14 | 0.440 | |
| 4c2z | MYA | Glycylpeptide N-tetradecanoyltransferase 1 | / | 0.440 | |
| 4ia7 | BIV | Vitamin D3 receptor A | / | 0.440 | |
| 4kwi | 1TJ | Reductase homolog | / | 0.440 | |
| 4njs | G08 | Protease | / | 0.440 | |
| 4ye3 | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.440 | |
| 4yt5 | H4M | H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338 | / | 0.440 | |
| 5a3b | APR | SIR2 family protein | / | 0.440 |