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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2qbs024Tyrosine-protein phosphatase non-receptor type 13.1.3.48

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2qbs024Tyrosine-protein phosphatase non-receptor type 13.1.3.481.000
1q6nP90Tyrosine-protein phosphatase non-receptor type 13.1.3.480.562
2b07598Tyrosine-protein phosphatase non-receptor type 13.1.3.480.552
2fjn073Tyrosine-protein phosphatase non-receptor type 13.1.3.480.549
1q6p213Tyrosine-protein phosphatase non-receptor type 13.1.3.480.544
1q6s214Tyrosine-protein phosphatase non-receptor type 13.1.3.480.544
1q6t600Tyrosine-protein phosphatase non-receptor type 13.1.3.480.528
1jf7TBHTyrosine-protein phosphatase non-receptor type 13.1.3.480.479
2qbr910Tyrosine-protein phosphatase non-receptor type 13.1.3.480.476
4kcfAKMFAD-dependent oxidoreductase/0.462
1cbrREACellular retinoic acid-binding protein 1/0.461
2w4qCBWProstaglandin reductase 21.3.1.480.453
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.452
3s5wNAPL-ornithine N(5)-monooxygenase/0.445
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.443
3gyuDL7Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily/0.441