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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2q3rFMN12-oxophytodienoate reductase 11.3.1.42

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2q3rFMN12-oxophytodienoate reductase 11.3.1.421.000
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.630
1icqFMN12-oxophytodienoate reductase 11.3.1.420.610
1icpFMN12-oxophytodienoate reductase 11.3.1.420.597
4tmbFMNOld yellow enzyme/0.580
1icsFMN12-oxophytodienoate reductase 11.3.1.420.573
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.571
4rnuFMNNADPH dehydrogenase 11.6.99.10.554
1q45FMN12-oxophytodienoate reductase 31.3.1.420.549
4rnvFMNNADPH dehydrogenase 11.6.99.10.547
3p82FMNPentaerythritol tetranitrate reductase/0.541
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.538
3p74FMNPentaerythritol tetranitrate reductase/0.538
1bwlFMNNADPH dehydrogenase 11.6.99.10.531
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.531
3f03FMNPentaerythritol tetranitrate reductase/0.529
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.528
2abbFMNPentaerythritol tetranitrate reductase/0.521
4rnwFMNNADPH dehydrogenase 11.6.99.10.521
4e2bFMNDehydrogenase/0.512
4e2dFMNDehydrogenase/0.507
1h50FMNPentaerythritol tetranitrate reductase/0.506
1vyrFMNPentaerythritol tetranitrate reductase/0.505
3gkaFMNN-ethylmaleimide reductase/0.505
1h63FMNPentaerythritol tetranitrate reductase/0.504
3p67FMNPentaerythritol tetranitrate reductase/0.503
3p62FMNPentaerythritol tetranitrate reductase/0.501
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.499
4tmcFMNOld yellow enzyme/0.497
3atzFMNProstaglandin F2a synthase/0.496
3p84FMNPentaerythritol tetranitrate reductase/0.494
4df2FMNNADPH dehydrogenase/0.493
4m5pFMNNADPH dehydrogenase/0.493
4jicFMNGTN Reductase/0.489
3atyFMNProstaglandin F2a synthase/0.484
4h6kFMNNADPH dehydrogenase 11.6.99.10.481
1h51FMNPentaerythritol tetranitrate reductase/0.479
1oycFMNNADPH dehydrogenase 11.6.99.10.477
1oyaFMNNADPH dehydrogenase 11.6.99.10.475
1bwkFMNNADPH dehydrogenase 11.6.99.10.472
3p8iFMNPentaerythritol tetranitrate reductase/0.465
3p8jFMNPentaerythritol tetranitrate reductase/0.464
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.462
1qbgFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.457
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.456
3tjlFMNNADPH dehydrogenase/0.455
3l5lFMNXenobiotic reductase/0.451
4rnxFMNNADPH dehydrogenase 11.6.99.10.449
4k7yFMNNADPH dehydrogenase 11.6.99.10.447
1kbqFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.446
1d4aFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.443
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.442
1dxqFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.440
4uthFMNXenobiotic reductase/0.440