scPDB - Distribution of Binding site Similarity values of 2q0c entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2q0c	CTP	Poly(A) polymerase, putative

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2q0c	CTP	Poly(A) polymerase, putative	/	1.000
2q0f	UTP	Poly(A) polymerase, putative	/	0.678
2ikf	UTP	Poly(A) polymerase, putative	/	0.635
2q0d	ATP	Poly(A) polymerase, putative	/	0.603
2nom	DUT	Poly(A) polymerase, putative	/	0.556
2q0f	U5P	Poly(A) polymerase, putative	/	0.521
2q0g	UPU	Poly(A) polymerase, putative	/	0.511
3hiy	UTP	Uncharacterized protein	/	0.483
2b56	UTP	RNA editing complex protein MP57	/	0.469
4fhp	UTP	Terminal uridylyltransferase cid1	/	0.464