scPDB - Distribution of Binding site Similarity values of 2ore entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2ore	SAH	DNA adenine methylase	2.1.1.72

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2ore	SAH	DNA adenine methylase	2.1.1.72	1.000
4rtr	SAM	DNA adenine methylase	2.1.1.72	0.584
4gol	SA8	DNA adenine methylase	2.1.1.72	0.567
4gbe	SAH	DNA adenine methylase	2.1.1.72	0.540
2g1p	SAH	DNA adenine methylase	2.1.1.72	0.521
4rtn	SAH	DNA adenine methylase	2.1.1.72	0.489
4rtj	SFG	DNA adenine methylase	2.1.1.72	0.485
4rtl	SFG	DNA adenine methylase	2.1.1.72	0.485
4rtm	SAM	DNA adenine methylase	2.1.1.72	0.483
4rts	SAM	DNA adenine methylase	2.1.1.72	0.482
4rtp	SAM	DNA adenine methylase	2.1.1.72	0.476
4rtk	SAH	DNA adenine methylase	2.1.1.72	0.470
4rto	SFG	DNA adenine methylase	2.1.1.72	0.457
2dpm	SAM	Modification methylase DpnIIA	2.1.1.72	0.443