Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 1.000 | |
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.708 | |
1nzz | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.695 | |
1o02 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.628 | |
1o01 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.601 | |
1nzw | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.598 | |
4fr8 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.592 | |
1o00 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.588 | |
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.576 | |
4pz2 | NAD | Aldehyde dehydrogenase 2-6 | / | 0.556 | |
1cw3 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.553 | |
1o04 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.549 | |
2onm | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.547 | |
2bhp | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.522 | |
2ehu | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.505 | |
2j5n | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.497 | |
2eii | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.493 | |
2j40 | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.486 | |
4v37 | NAD | Betaine aldehyde dehydrogenase, chloroplastic | 1.2.1.8 | 0.486 | |
4pxl | NAD | Aldehyde dehydrogenase3 | / | 0.483 | |
2ehq | NAP | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.479 | |
4pt0 | NAD | Aldehyde dehydrogenase | / | 0.477 | |
1nzx | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.473 | |
1bxs | NAD | Retinal dehydrogenase 1 | 1.2.1.36 | 0.466 | |
4x4l | NAI | Retinal dehydrogenase 1 | 1.2.1.36 | 0.460 | |
5eyu | NAD | Betaine-aldehyde dehydrogenase | / | 0.453 | |
4fr8 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.450 | |
4zz7 | NAD | Methylmalonate-semialdehyde dehydrogenase | / | 0.446 | |
4i1w | NAD | 2-aminomuconate 6-semialdehyde dehydrogenase | / | 0.445 | |
3haz | NAD | Bifunctional protein PutA | / | 0.444 |