sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2oby | NAP | Quinone oxidoreductase PIG3 | 1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 2oby | NAP | Quinone oxidoreductase PIG3 | 1 | 1.000 | |
| 2j8z | NAP | Quinone oxidoreductase PIG3 | 1 | 0.588 | |
| 4hfm | NAP | 2-alkenal reductase (NADP(+)-dependent) | / | 0.477 | |
| 2vna | NAP | Prostaglandin reductase 2 | 1.3.1.48 | 0.467 | |
| 2zb3 | NDP | Prostaglandin reductase 2 | 1.3.1.48 | 0.463 | |
| 2j3i | NAP | NADPH-dependent oxidoreductase 2-alkenal reductase | 1.3.1.74 | 0.459 | |
| 4b7x | NAP | Probable oxidoreductase | / | 0.454 | |
| 2y05 | NAP | Prostaglandin reductase 1 | / | 0.443 |