Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2nxe | SAM | Ribosomal protein L11 methyltransferase | 2.1.1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 2nxe | SAM | Ribosomal protein L11 methyltransferase | 2.1.1 | 1.000 | |
| 3egv | SAH | Ribosomal protein L11 methyltransferase | 2.1.1 | 0.489 | |
| 3cjt | SAH | Ribosomal protein L11 methyltransferase | 2.1.1 | 0.488 | |
| 5e8j | SAH | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.454 | |
| 2eg5 | SAH | 7-methylxanthosine synthase 1 | / | 0.450 | |
| 4nt3 | ZAW | Lactoperoxidase | 1.11.1.7 | 0.446 |