scPDB - Distribution of Binding site Similarity values of 2nad entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2nad	NAD	Formate dehydrogenase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2nad	NAD	Formate dehydrogenase	/	1.000
1men	GAR	Trifunctional purine biosynthetic protein adenosine-3	2.1.2.2	0.443
1onf	FAD	Glutathione reductase	1.8.1.7	0.442
2e1m	FAD	L-glutamate oxidase	/	0.442
4dfg	0JV	Gag-Pol polyprotein	3.4.23.16	0.441