scPDB - Distribution of Binding site Similarity values of 2j9f entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2j9f	THV	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial	1.2.4.4

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2j9f	THV	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial	1.2.4.4	1.000
2j9f	THV	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	1.2.4.4	1.000
1umc	TDP	2-oxoisovalerate dehydrogenase subunit alpha	1.2.4.4	0.490
1umc	TDP	2-oxoisovalerate dehydrogenase subunit beta	1.2.4.4	0.490
3zhu	TD8	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.490
3zhs	TD6	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.479
3zht	TD9	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.464
3zhq	TPP	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.440