scPDB - Distribution of Binding site Similarity values of 2h23 entry / Site 3

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2h23	SAH	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2h23	SAH	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	1.000
1mlv	SAH	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.628
1ozv	SAH	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.607
2h2j	SFG	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.598
1p0y	SAH	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.580
2h21	SAM	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.555
2h2e	SA8	Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic	2.1.1.127	0.546
4ktl	1CQ	Cytochrome P450	/	0.468
4gxs	0YS	Glutamate receptor 2	/	0.449
3oxf	SAH	Histone-lysine N-methyltransferase SMYD3	2.1.1.43	0.448
2ylr	NAP	Phenylacetone monooxygenase	1.14.13.92	0.442
1f4f	TP3	Thymidylate synthase	/	0.441
1xe5	5FE	Plasmepsin-2	3.4.23.39	0.440