Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2gouFMNNADH:flavin oxidoreductase Sye1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2gouFMNNADH:flavin oxidoreductase Sye1/1.000
4awtFMNNADH:flavin oxidoreductase Sye1/0.667
2gqaFMNNADH:flavin oxidoreductase Sye1/0.645
4awsFMNNADH:flavin oxidoreductase Sye1/0.615
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.538
3p8iFMNPentaerythritol tetranitrate reductase/0.531
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.525
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.524
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.521
1icsFMN12-oxophytodienoate reductase 11.3.1.420.517
4b5nFMNNAD(P)H:flavin oxidoreductase Sye4/0.515
4tmbFMNOld yellow enzyme/0.511
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.509
4jicFMNGTN Reductase/0.509
4rnvFMNNADPH dehydrogenase 11.6.99.10.508
1h50FMNPentaerythritol tetranitrate reductase/0.507
3p84FMNPentaerythritol tetranitrate reductase/0.505
3p8jFMNPentaerythritol tetranitrate reductase/0.501
1h63FMNPentaerythritol tetranitrate reductase/0.498
4m5pFMNNADPH dehydrogenase/0.496
3gkaFMNN-ethylmaleimide reductase/0.495
1icqFMN12-oxophytodienoate reductase 11.3.1.420.489
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.489
3p82FMNPentaerythritol tetranitrate reductase/0.485
3f03FMNPentaerythritol tetranitrate reductase/0.484
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.483
1icpFMN12-oxophytodienoate reductase 11.3.1.420.482
1vyrFMNPentaerythritol tetranitrate reductase/0.479
3tjlFMNNADPH dehydrogenase/0.476
3n19FNRXenobiotic reductase/0.475
1bwlFMNNADPH dehydrogenase 11.6.99.10.473
1h51FMNPentaerythritol tetranitrate reductase/0.472
3kruFMNNADH:flavin oxidoreductase/NADH oxidase/0.472
4rnwFMNNADPH dehydrogenase 11.6.99.10.472
4k7yFMNNADPH dehydrogenase 11.6.99.10.471
1q45FMN12-oxophytodienoate reductase 31.3.1.420.469
1z41FMNNADPH dehydrogenase/0.469
3p74FMNPentaerythritol tetranitrate reductase/0.468
4rnxFMNNADPH dehydrogenase 11.6.99.10.468
4h0vNADIota toxin component Ia/0.463
2abbFMNPentaerythritol tetranitrate reductase/0.461
1bwkFMNNADPH dehydrogenase 11.6.99.10.460
1k02FMNNADPH dehydrogenase 11.6.99.10.459
4df2FMNNADPH dehydrogenase/0.458
4rnuFMNNADPH dehydrogenase 11.6.99.10.456
3l5lFMNXenobiotic reductase/0.455
4e2dFMNDehydrogenase/0.455
3q7fED2Uncharacterized protein/0.450
3p67FMNPentaerythritol tetranitrate reductase/0.447
1d4aFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.446
1z44FMNNADPH dehydrogenase/0.446
3e34ED1Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha/0.444
3e34ED1Protein farnesyltransferase subunit beta2.5.1.580.444
1z48FMNNADPH dehydrogenase/0.443
3bw4FMNPutative 2-nitropropane dioxygenase/0.443
3gr8FMNNADPH dehydrogenase/0.442
1goxFMNPeroxisomal (S)-2-hydroxy-acid oxidase1.1.3.150.441
3atzFMNProstaglandin F2a synthase/0.440
4e2bFMNDehydrogenase/0.440