Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2gevCOKPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2gevCOKPantothenate kinase2.7.1.331.000
2getCOKPantothenate kinase2.7.1.330.599
2zsdCOAPantothenate kinase2.7.1.330.518
2gesCOKPantothenate kinase2.7.1.330.516
2geuCOKPantothenate kinase2.7.1.330.510
4bfvZVVPantothenate kinase2.7.1.330.502
4bfsZVSPantothenate kinase2.7.1.330.495
4bfwZVWPantothenate kinase2.7.1.330.483
3af1GDPPantothenate kinase2.7.1.330.482
4bftZVTPantothenate kinase2.7.1.330.482
3af2ACPPantothenate kinase2.7.1.330.474
1esmCOAPantothenate kinase2.7.1.330.460
2zs8ADPPantothenate kinase2.7.1.330.459
3af0GDPPantothenate kinase2.7.1.330.456
4bfxZVXPantothenate kinase2.7.1.330.444