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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2getCOKPantothenate kinase2.7.1.33

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2getCOKPantothenate kinase2.7.1.331.000
2gesCOKPantothenate kinase2.7.1.330.618
2gevCOKPantothenate kinase2.7.1.330.578
4bfsZVSPantothenate kinase2.7.1.330.547
2zsdCOAPantothenate kinase2.7.1.330.545
2geuCOKPantothenate kinase2.7.1.330.536
1esmCOAPantothenate kinase2.7.1.330.506
3af2ACPPantothenate kinase2.7.1.330.500
3af4GCPPantothenate kinase2.7.1.330.478
2zsbADPPantothenate kinase2.7.1.330.471
4bftZVTPantothenate kinase2.7.1.330.469
2zsaADPPantothenate kinase2.7.1.330.453
3af1GDPPantothenate kinase2.7.1.330.452
4bfxZVXPantothenate kinase2.7.1.330.451
3aezGDPPantothenate kinase2.7.1.330.445
4bfvZVVPantothenate kinase2.7.1.330.443