Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2g5w8PG12-oxophytodienoate reductase 31.3.1.42

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2g5w8PG12-oxophytodienoate reductase 31.3.1.421.000
1h61PDNPentaerythritol tetranitrate reductase/0.460
4gdy0X1Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.459
2wzySQXSoluble acetylcholine receptor/0.456
3q43D66M1 family aminopeptidase3.4.110.454
1d4aFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.453
2xq0BESLeukotriene A-4 hydrolase homolog3.3.2.60.446
4r81FMNPredicted NADH dehydrogenase/0.442
2gv8NDPThiol-specific monooxygenase1.14.130.441
1icpFMN12-oxophytodienoate reductase 11.3.1.420.440
4ge70K5Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.440