scPDB - Distribution of Binding site Similarity values of 2g1p entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2g1p	SAH	DNA adenine methylase	2.1.1.72

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2g1p	SAH	DNA adenine methylase	2.1.1.72	1.000
4gbe	SAH	DNA adenine methylase	2.1.1.72	0.590
4rtj	SFG	DNA adenine methylase	2.1.1.72	0.561
4rtr	SAM	DNA adenine methylase	2.1.1.72	0.548
4rtk	SAH	DNA adenine methylase	2.1.1.72	0.539
4rtm	SAM	DNA adenine methylase	2.1.1.72	0.538
2dpm	SAM	Modification methylase DpnIIA	2.1.1.72	0.521
4rtl	SFG	DNA adenine methylase	2.1.1.72	0.520
2ore	SAH	DNA adenine methylase	2.1.1.72	0.518
4rts	SAM	DNA adenine methylase	2.1.1.72	0.494
4gol	SA8	DNA adenine methylase	2.1.1.72	0.492
4rtp	SAM	DNA adenine methylase	2.1.1.72	0.452
4rto	SFG	DNA adenine methylase	2.1.1.72	0.447