Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2cahNDPCatalase1.11.1.6

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2cahNDPCatalase1.11.1.61.000
4e37NDPCatalase1.11.1.60.616
1dgbNDPCatalase1.11.1.60.549
8catNDPCatalase1.11.1.60.518
3nwlNDPCatalase1.11.1.60.510
1dghNDPCatalase1.11.1.60.487
1dggNDPCatalase1.11.1.60.485
1dgfNDPCatalase1.11.1.60.483
4blcNDPCatalase1.11.1.60.479
7catNDPCatalase1.11.1.60.474
3g49NAPCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.467
2qo6CHDFatty acid-binding protein 10-A, liver basic/0.446
4qecNAPElxO/0.442