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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.115

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.1151.000
2c9zQUEAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.624
2c1zU2FAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.545
3hbfMYCFlavonoid 3-O-glucosyltransferase2.4.10.480
2fapRADPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.454
2fapRADSerine/threonine-protein kinase mTOR2.7.11.10.454
4relKMPGlycosyltransferase/0.451
1nsgRADPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.442
1nsgRADSerine/threonine-protein kinase mTOR2.7.11.10.442