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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2bpoNAPNADPH--cytochrome P450 reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2bpoNAPNADPH--cytochrome P450 reductase/1.000
2bf4NAPNADPH--cytochrome P450 reductase/0.719
2bn4NAPNADPH--cytochrome P450 reductase/0.565
3zc3NAPFerredoxin--NADP reductase1.18.1.20.504
1tllNAPNitric oxide synthase, brain1.14.13.390.497
1amoNAPNADPH--cytochrome P450 reductase/0.491
4y9rNAPNADPH--cytochrome P450 reductase/0.489
4y7cNAPNADPH--cytochrome P450 reductase/0.486
1ja1NAPNADPH--cytochrome P450 reductase/0.484
1w87NAPFerredoxin--NADP reductase1.18.1.20.482
3qfcNAPNADPH--cytochrome P450 reductase/0.481
3qfsNAPNADPH--cytochrome P450 reductase/0.477
1f20NAPNitric oxide synthase, brain1.14.13.390.474
4y9uNAPNADPH--cytochrome P450 reductase/0.473
2rc6NAPFerredoxin--NADP reductase/0.468
3qftNAPNADPH--cytochrome P450 reductase/0.466
3qfrNAPNADPH--cytochrome P450 reductase/0.463
4yau2AMNADPH--cytochrome P450 reductase/0.457
1gjrNAPFerredoxin--NADP reductase1.18.1.20.452
1kr2TADNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.449
3qe2NAPNADPH--cytochrome P450 reductase/0.447
4yaf2AMNADPH--cytochrome P450 reductase/0.441
3ojxNAPNADPH--cytochrome P450 reductase/0.440