Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1ylrFMNOxygen-insensitive NAD(P)H nitroreductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1ylrFMNOxygen-insensitive NAD(P)H nitroreductase/1.000
1yluFMNOxygen-insensitive NAD(P)H nitroreductase/0.608
1necFMNOxygen-insensitive NAD(P)H nitroreductase10.607
3x22FMNOxygen-insensitive NAD(P)H nitroreductase/0.603
1ooqFMNOxygen-insensitive NAD(P)H nitroreductase/0.585
1kqdFMNOxygen-insensitive NAD(P)H nitroreductase/0.584
1ykiFMNOxygen-insensitive NAD(P)H nitroreductase/0.570
1ds7FMNOxygen-insensitive NAD(P)H nitroreductase/0.567
1oonFMNOxygen-insensitive NAD(P)H nitroreductase/0.567
3x21FMNOxygen-insensitive NAD(P)H nitroreductase/0.549
1kqbFMNOxygen-insensitive NAD(P)H nitroreductase/0.546
1kqcFMNOxygen-insensitive NAD(P)H nitroreductase/0.542
1icvFMNOxygen-insensitive NAD(P)H nitroreductase/0.540
1icuFMNOxygen-insensitive NAD(P)H nitroreductase/0.536
1oo5FMNOxygen-insensitive NAD(P)H nitroreductase/0.533
1vfrFMNMajor NAD(P)H-flavin oxidoreductase1.6.990.529
3ge6FMNNitroreductase/0.479
3qdlFMNOxygen-insensitive NADPH nitroreductase/0.459
2hayFMNPutative NAD(P)H-flavin oxidoreductase/0.454