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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.602
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.571
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441