Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1uop | GLY_PHE_GLU_PRO | Prolyl endopeptidase | 3.4.21.26 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
1uop | GLY_PHE_GLU_PRO | Prolyl endopeptidase | 3.4.21.26 | 1.000 | |
1e8m | P0H | Prolyl endopeptidase | 3.4.21.26 | 0.620 | |
1uoo | GLY_PHE_ARG_PRO | Prolyl endopeptidase | 3.4.21.26 | 0.611 | |
4bcd | TDV | Prolyl endopeptidase | 3.4.21.26 | 0.587 | |
3eq9 | X97 | Prolyl endopeptidase | 3.4.21.26 | 0.581 | |
1uoq | GLU_PHE_SER_PRO | Prolyl endopeptidase | 3.4.21.26 | 0.542 | |
4gdy | 0X1 | Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial | 2.6.1.39 | 0.444 | |
3gw9 | VNI | Lanosterol 14-alpha-demethylase | / | 0.442 |