scPDB - Distribution of Binding site Similarity values of 1thn entry / Site 3

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1thn	ADP	Anti-sigma F factor

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1thn	ADP	Anti-sigma F factor	/	1.000
1til	ATP	Anti-sigma F factor	/	0.525
1l0o	ADP	Anti-sigma F factor	/	0.480
1i59	ANP	Chemotaxis protein CheA	2.7.13.3	0.478
1i5c	ADP	Chemotaxis protein CheA	2.7.13.3	0.468
3zhs	TD6	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.468
2e0a	ANP	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial	2.7.11.2	0.462
1i5b	ANP	Chemotaxis protein CheA	2.7.13.3	0.451
4cax	646	Glycylpeptide N-tetradecanoyltransferase	2.3.1.97	0.449
1i59	ADP	Chemotaxis protein CheA	2.7.13.3	0.448
1i5a	ACP	Chemotaxis protein CheA	2.7.13.3	0.448
3zhv	TDW	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.445
2zdy	ADP	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial	2.7.11.2	0.443
1i58	ADP	Chemotaxis protein CheA	2.7.13.3	0.442
2eix	FAD	NADH-cytochrome b5 reductase	/	0.442
3zht	TD9	Multifunctional 2-oxoglutarate metabolism enzyme	1.2.4.2	0.442
3pqb	VGP	Putative oxidoreductase	/	0.440