scPDB - Distribution of Binding site Similarity values of 1t2a entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1t2a	GDP	GDP-mannose 4,6 dehydratase	4.2.1.47

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1t2a	GDP	GDP-mannose 4,6 dehydratase	4.2.1.47	1.000
1n7h	GDP	GDP-mannose 4,6 dehydratase 2	4.2.1.47	0.570
2z1m	GDP	GDP-mannose 4,6-dehydratase	/	0.523
2pk3	GDD	GDP-6-deoxy-D-mannose reductase	/	0.477
1sb9	UPG	WbpP	/	0.462
3lu1	UD2	UDP-N-acetylglucosamine 4-epimerase	/	0.440