Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1sus | SAH | Caffeoyl-CoA O-methyltransferase | 2.1.1.104 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 1sus | SAH | Caffeoyl-CoA O-methyltransferase | 2.1.1.104 | 1.000 | |
| 3a7d | FBN | Catechol O-methyltransferase | 2.1.1.6 | 0.501 | |
| 3tr6 | SAH | O-methyltransferase | / | 0.469 | |
| 4oa5 | SAH | O-methyltransferase family protein | / | 0.465 | |
| 3c3y | SAH | O-methyltransferase | / | 0.461 | |
| 3swr | SFG | DNA (cytosine-5)-methyltransferase 1 | 2.1.1.37 | 0.459 | |
| 3cbg | SAH | O-methyltransferase | / | 0.456 | |
| 4qpp | SAH | Protein arginine N-methyltransferase 6 | / | 0.455 | |
| 2hnk | SAH | SAM-dependent O-methyltransferase | / | 0.452 | |
| 2nxe | SAM | Ribosomal protein L11 methyltransferase | 2.1.1 | 0.450 | |
| 5bp9 | SAH | Putative methyltransferase protein | / | 0.448 |