Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1susSAHCaffeoyl-CoA O-methyltransferase2.1.1.104

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1susSAHCaffeoyl-CoA O-methyltransferase2.1.1.1041.000
3a7dFBNCatechol O-methyltransferase2.1.1.60.501
3tr6SAHO-methyltransferase/0.469
4oa5SAHO-methyltransferase family protein/0.465
3c3ySAHO-methyltransferase/0.461
3swrSFGDNA (cytosine-5)-methyltransferase 12.1.1.370.459
3cbgSAHO-methyltransferase/0.456
4qppSAHProtein arginine N-methyltransferase 6/0.455
2hnkSAHSAM-dependent O-methyltransferase/0.452
2nxeSAMRibosomal protein L11 methyltransferase2.1.10.450
5bp9SAHPutative methyltransferase protein/0.448