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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1ry0PG2Aldo-keto reductase family 1 member C3

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1ry0PG2Aldo-keto reductase family 1 member C3/1.000
1ry8RUTAldo-keto reductase family 1 member C3/0.596
2f3815MAldo-keto reductase family 1 member C3/0.564
4dbuBT9Aldo-keto reductase family 1 member C3/0.538
1zq5E04Aldo-keto reductase family 1 member C3/0.513
4dbw511Aldo-keto reductase family 1 member C3/0.496
4h7c10HAldo-keto reductase family 1 member C3/0.496
4fam0SZAldo-keto reductase family 1 member C3/0.494
3r6iJMSAldo-keto reductase family 1 member C3/0.492
3r7mSUZAldo-keto reductase family 1 member C3/0.486
4dbs0HVAldo-keto reductase family 1 member C3/0.485
3r43ID8Aldo-keto reductase family 1 member C3/0.481
3r8hZOMAldo-keto reductase family 1 member C3/0.476
4hmn16JAldo-keto reductase family 1 member C3/0.467
4fa30SLAldo-keto reductase family 1 member C3/0.456
3uweVJJAldo-keto reductase family 1 member C3/0.455
3ug8IMNAldo-keto reductase family 1 member C3/0.452
1s2cFLFAldo-keto reductase family 1 member C3/0.444
3r8gIZPAldo-keto reductase family 1 member C3/0.442